Cow genome map
| Conread name: | rfbs3907b_e1.y1 |
| Conread position: | 1-257 |
| Cow position: | chrX:13826468-13826212 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 244, 237 |
| Conread position: | 1-316 |
| Cow position: | chrX:25310202-25310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 1-346 |
| Cow position: | chrX:25310118-25310463 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 147, 172 |
| Conread position: | 2-315 |
| Cow position: | chrX:14181329-14181016 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 2-316 |
| Cow position: | chrX:13826635-13826321 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-318 |
| Cow position: | chrX:13826803-13826487 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 82 |
| Conread position: | 2-321 |
| Cow position: | chrX:14181245-14180926 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 3-314 |
| Cow position: | chrX:25325105-25324794 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 3-316 |
| Cow position: | chrX:25324601-25324288 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 3-346 |
| Cow position: | chrX:25325273-25324930 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 4-295 |
| Cow position: | chrX:29044945-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 4-314 |
| Cow position: | chrX:25309785-25310095 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-314 |
| Cow position: | chrX:25309869-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 4-314 |
| Cow position: | chrX:25325356-25325046 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 4-316 |
| Cow position: | chrX:25309953-25310265 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 4-316 |
| Cow position: | chrX:25310037-25310349 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 4-316 |
| Cow position: | chrX:25324936-25324624 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 4-316 |
| Cow position: | chrX:25325020-25324708 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 4-316 |
| Cow position: | chrX:25325440-25325128 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 4-316 |
| Cow position: | chrX:25325524-25325212 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 4-316 |
| Cow position: | chrX:29045113-29044801 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 238 |
| Conread position: | 4-321 |
| Cow position: | chrX:25324768-25324451 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 4-321 |
| Cow position: | chrX:25325188-25324871 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 150, 133 |
| Conread position: | 4-324 |
| Cow position: | chrX:13826717-13826397 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 4-346 |
| Cow position: | chrX:29045029-29044687 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 246, 237 |
| Conread position: | 4-346 |
| Cow position: | chrX:29045197-29044855 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 4-346 |
| Cow position: | chrX:29045281-29044939 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 6-316 |
| Cow position: | chrX:25325606-25325296 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 83 |
| Conread position: | 10-318 |
| Cow position: | chrX:29045758-29045450 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 240, 232 |
| Conread position: | 16-314 |
| Cow position: | chrX:25309713-25310011 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 234, 226 |
| Conread position: | 17-314 |
| Cow position: | chrX:12627765-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 22-314 |
| Cow position: | chrX:29045830-29045538 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 123, 137 |
| Conread position: | 24-314 |
| Cow position: | chrX:13826949-13826659 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 106-316 |
| Cow position: | chrX:29045830-29045620 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 73 |
Show alignments to all cow chromosomes.