Cow genome map
| Conread name: | rfbs3925b_b18.y1 |
| Conread position: | 2-111 |
| Cow position: | chr1:30417920-30418030 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-150 |
| Cow position: | chr1:5636931-5637075 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 4-150 |
| Cow position: | chr1:42545653-42545795 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 5-102 |
| Cow position: | chr1:84787395-84787297 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-107 |
| Cow position: | chr1:23372985-23372881 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 5-108 |
| Cow position: | chr1:48301326-48301430 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-118 |
| Cow position: | chr1:64458092-64457976 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 5-120 |
| Cow position: | chr1:95049741-95049855 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 5-125 |
| Cow position: | chr1:46100715-46100836 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-125 |
| Cow position: | chr1:67539686-67539564 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 5-144 |
| Cow position: | chr1:95152998-95152861 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 113 |
| Conread position: | 5-149 |
| Cow position: | chr1:45873945-45874093 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 5-150 |
| Cow position: | chr1:42868815-42868952 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 5-150 |
| Cow position: | chr1:86579087-86578949 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 5-151 |
| Cow position: | chr1:36998310-36998169 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 5-151 |
| Cow position: | chr1:42541724-42541581 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 5-151 |
| Cow position: | chr1:43311906-43312048 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-151 |
| Cow position: | chr1:54478454-54478312 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-151 |
| Cow position: | chr1:56477719-56477575 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 5-151 |
| Cow position: | chr1:67529182-67529038 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 5-151 |
| Cow position: | chr1:69694867-69695009 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 5-151 |
| Cow position: | chr1:81858776-81858919 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 5-151 |
| Cow position: | chr1:85549952-85550095 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 107 |
| Conread position: | 5-151 |
| Cow position: | chr1:98413897-98413755 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-151 |
| Cow position: | chr1:99642243-99642384 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 5-151 |
| Cow position: | chr1:101177640-101177498 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 5-152 |
| Cow position: | chr1:8287506-8287648 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 5-152 |
| Cow position: | chr1:65881930-65881789 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 5-152 |
| Cow position: | chr1:72011688-72011831 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-152 |
| Cow position: | chr1:72813743-72813599 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 5-152 |
| Cow position: | chr1:91066027-91066169 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 6-109 |
| Cow position: | chr1:45283317-45283214 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 6-152 |
| Cow position: | chr1:69940700-69940841 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 7-106 |
| Cow position: | chr1:63461001-63460901 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-152 |
| Cow position: | chr1:97232083-97231942 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 8-110 |
| Cow position: | chr1:39684024-39684125 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-115 |
| Cow position: | chr1:70044475-70044367 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 8-151 |
| Cow position: | chr1:49980831-49980693 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 8-151 |
| Cow position: | chr1:56225908-56225768 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 8-151 |
| Cow position: | chr1:76613013-76613152 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 8-151 |
| Cow position: | chr1:92684572-92684712 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 8-152 |
| Cow position: | chr1:48769924-48769784 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 8-152 |
| Cow position: | chr1:97696865-97696729 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 10-111 |
| Cow position: | chr1:40530983-40531085 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 10-116 |
| Cow position: | chr1:22467466-22467572 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-147 |
| Cow position: | chr1:24406777-24406910 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 10-151 |
| Cow position: | chr1:2975874-2976012 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 10-151 |
| Cow position: | chr1:8670893-8670756 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 10-151 |
| Cow position: | chr1:34856508-34856645 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 10-151 |
| Cow position: | chr1:63530678-63530541 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 10-151 |
| Cow position: | chr1:80336129-80336266 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 10-151 |
| Cow position: | chr1:95974520-95974383 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 10-151 |
| Cow position: | chr1:96081599-96081463 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 10-152 |
| Cow position: | chr1:76735361-76735496 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 10-172 |
| Cow position: | chr1:11770116-11770280 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 11-110 |
| Cow position: | chr1:32035591-32035691 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-110 |
| Cow position: | chr1:70416641-70416741 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-110 |
| Cow position: | chr1:77685862-77685962 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-110 |
| Cow position: | chr1:81638667-81638567 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-111 |
| Cow position: | chr1:52506053-52506153 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 11-112 |
| Cow position: | chr1:98594684-98594583 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-117 |
| Cow position: | chr1:94823273-94823380 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-123 |
| Cow position: | chr1:81364379-81364268 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-125 |
| Cow position: | chr1:731854-731970 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-125 |
| Cow position: | chr1:64706611-64706499 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-125 |
| Cow position: | chr1:76080924-76080811 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 11-127 |
| Cow position: | chr1:32014315-32014202 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 11-127 |
| Cow position: | chr1:73551389-73551506 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 11-127 |
| Cow position: | chr1:92603138-92603023 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 11-129 |
| Cow position: | chr1:11489040-11489159 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 11-135 |
| Cow position: | chr1:31630168-31630291 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-136 |
| Cow position: | chr1:97939076-97938953 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-142 |
| Cow position: | chr1:42178864-42178737 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-144 |
| Cow position: | chr1:22461119-22461248 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-149 |
| Cow position: | chr1:6941587-6941445 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-149 |
| Cow position: | chr1:6959000-6958858 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-149 |
| Cow position: | chr1:42360407-42360271 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 11-149 |
| Cow position: | chr1:43311652-43311787 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 11-149 |
| Cow position: | chr1:61011300-61011166 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 11-149 |
| Cow position: | chr1:95835679-95835813 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 11-150 |
| Cow position: | chr1:242676-242541 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr1:6381890-6381756 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 11-150 |
| Cow position: | chr1:34159955-34159819 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr1:45223700-45223565 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr1:45315517-45315652 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-150 |
| Cow position: | chr1:93528820-93528683 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 11-150 |
| Cow position: | chr1:95153341-95153207 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-150 |
| Cow position: | chr1:100474353-100474218 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:4032751-4032615 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:4291283-4291149 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 11-151 |
| Cow position: | chr1:6731299-6731164 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 11-151 |
| Cow position: | chr1:6826180-6826313 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 11-151 |
| Cow position: | chr1:8624331-8624466 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 11-151 |
| Cow position: | chr1:10778682-10778546 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 11-151 |
| Cow position: | chr1:22824024-22823888 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:23512541-23512676 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 11-151 |
| Cow position: | chr1:24534138-24534271 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 11-151 |
| Cow position: | chr1:34771384-34771520 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr1:39068837-39068973 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:45478744-45478876 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 11-151 |
| Cow position: | chr1:46245622-46245766 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 11-151 |
| Cow position: | chr1:47886361-47886500 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 11-151 |
| Cow position: | chr1:53308275-53308406 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-151 |
| Cow position: | chr1:53370202-53370068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 11-151 |
| Cow position: | chr1:54157415-54157277 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 11-151 |
| Cow position: | chr1:54258685-54258550 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-151 |
| Cow position: | chr1:55230095-55229959 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:55428837-55428974 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 11-151 |
| Cow position: | chr1:63079126-63078993 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 11-151 |
| Cow position: | chr1:68672483-68672614 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 11-151 |
| Cow position: | chr1:69264927-69264793 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr1:69539810-69539674 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:74928003-74927867 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr1:81481263-81481399 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr1:81580296-81580161 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 11-151 |
| Cow position: | chr1:82880763-82880629 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 11-151 |
| Cow position: | chr1:84768760-84768896 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 11-151 |
| Cow position: | chr1:87197939-87197803 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr1:93554955-93554819 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr1:100552094-100551953 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 11-152 |
| Cow position: | chr1:3923681-3923818 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 11-152 |
| Cow position: | chr1:7971531-7971393 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 11-152 |
| Cow position: | chr1:11729294-11729157 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 11-152 |
| Cow position: | chr1:43148426-43148566 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 11-152 |
| Cow position: | chr1:43872201-43872338 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 11-152 |
| Cow position: | chr1:52039755-52039620 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 11-152 |
| Cow position: | chr1:78697653-78697789 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 11-152 |
| Cow position: | chr1:98576166-98576030 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 11-152 |
| Cow position: | chr1:102648397-102648260 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-154 |
| Cow position: | chr1:51860442-51860581 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-158 |
| Cow position: | chr1:92075603-92075465 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 11-159 |
| Cow position: | chr1:6972645-6972501 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-160 |
| Cow position: | chr1:57420617-57420757 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 11-160 |
| Cow position: | chr1:78067951-78068095 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 12-112 |
| Cow position: | chr1:72105524-72105422 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 12-125 |
| Cow position: | chr1:45673872-45673762 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 12-145 |
| Cow position: | chr1:64019403-64019532 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 12-149 |
| Cow position: | chr1:3914801-3914933 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 12-149 |
| Cow position: | chr1:19304688-19304556 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 12-151 |
| Cow position: | chr1:16060886-16061021 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 12-151 |
| Cow position: | chr1:19515501-19515636 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 12-151 |
| Cow position: | chr1:38706736-38706871 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 12-151 |
| Cow position: | chr1:48730714-48730846 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 12-151 |
| Cow position: | chr1:50992051-50991916 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 12-151 |
| Cow position: | chr1:72422291-72422425 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 12-151 |
| Cow position: | chr1:94226436-94226571 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 12-161 |
| Cow position: | chr1:45007586-45007437 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 13-108 |
| Cow position: | chr1:20537322-20537226 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 13-123 |
| Cow position: | chr1:95388584-95388475 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 13-125 |
| Cow position: | chr1:55194129-55194240 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 13-150 |
| Cow position: | chr1:47402645-47402512 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 13-151 |
| Cow position: | chr1:21787453-21787319 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 13-151 |
| Cow position: | chr1:53425294-53425159 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 13-151 |
| Cow position: | chr1:58037135-58037002 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 13-151 |
| Cow position: | chr1:77880617-77880747 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 13-151 |
| Cow position: | chr1:101632220-101632354 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 13-152 |
| Cow position: | chr1:93810546-93810411 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 14-151 |
| Cow position: | chr1:30504617-30504484 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 15-151 |
| Cow position: | chr1:37309404-37309536 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 15-151 |
| Cow position: | chr1:95215075-95215207 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 16-151 |
| Cow position: | chr1:61542805-61542935 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 17-127 |
| Cow position: | chr1:6989263-6989154 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 20-151 |
| Cow position: | chr1:26615964-26616093 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 109 |
Show alignments to all cow chromosomes.