Cow genome map
| Conread name: | rfbs3925b_b18.y1 |
| Conread position: | 4-152 |
| Cow position: | chr14:41191173-41191018 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 4-152 |
| Cow position: | chr14:50146802-50146945 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 5-110 |
| Cow position: | chr14:27076900-27077006 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-130 |
| Cow position: | chr14:18412670-18412544 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 5-149 |
| Cow position: | chr14:24981382-24981518 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 5-149 |
| Cow position: | chr14:27733528-27733665 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 5-149 |
| Cow position: | chr14:47672959-47672822 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 5-150 |
| Cow position: | chr14:18309384-18309243 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-151 |
| Cow position: | chr14:12035332-12035472 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 5-151 |
| Cow position: | chr14:14316810-14316948 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 5-151 |
| Cow position: | chr14:18763511-18763373 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 5-152 |
| Cow position: | chr14:15039690-15039548 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-152 |
| Cow position: | chr14:44084566-44084423 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-154 |
| Cow position: | chr14:35381513-35381658 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 6-149 |
| Cow position: | chr14:33457120-33456980 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 6-151 |
| Cow position: | chr14:19394288-19394426 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 8-151 |
| Cow position: | chr14:27275089-27275226 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 8-151 |
| Cow position: | chr14:37447536-37447402 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 8-151 |
| Cow position: | chr14:48744440-48744578 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 104 |
| Conread position: | 9-151 |
| Cow position: | chr14:17841364-17841227 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 9-152 |
| Cow position: | chr14:1978146-1978003 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 10-108 |
| Cow position: | chr14:13809868-13809967 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 10-127 |
| Cow position: | chr14:30260696-30260813 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 10-147 |
| Cow position: | chr14:19594209-19594076 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 10-149 |
| Cow position: | chr14:23078864-23078729 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 10-151 |
| Cow position: | chr14:4990931-4991067 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 10-151 |
| Cow position: | chr14:10078196-10078333 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 10-151 |
| Cow position: | chr14:23424190-23424324 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 10-151 |
| Cow position: | chr14:23442951-23443085 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 10-151 |
| Cow position: | chr14:46997967-46998104 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 11-110 |
| Cow position: | chr14:16761681-16761581 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-116 |
| Cow position: | chr14:18270290-18270396 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-116 |
| Cow position: | chr14:24785587-24785693 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-123 |
| Cow position: | chr14:42276555-42276663 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 11-135 |
| Cow position: | chr14:37436781-37436656 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-139 |
| Cow position: | chr14:21406781-21406657 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 11-149 |
| Cow position: | chr14:22941799-22941665 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 11-149 |
| Cow position: | chr14:29964949-29965082 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-150 |
| Cow position: | chr14:1859683-1859549 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 11-150 |
| Cow position: | chr14:12244456-12244320 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 11-150 |
| Cow position: | chr14:20481911-20481779 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 11-150 |
| Cow position: | chr14:28924097-28924232 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-150 |
| Cow position: | chr14:35503289-35503426 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 11-150 |
| Cow position: | chr14:38144178-38144043 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-151 |
| Cow position: | chr14:3943621-3943485 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 11-151 |
| Cow position: | chr14:4203169-4203033 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:4282577-4282444 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 11-151 |
| Cow position: | chr14:7036428-7036292 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:8101722-8101855 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 11-151 |
| Cow position: | chr14:10691699-10691561 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:11056801-11056668 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 11-151 |
| Cow position: | chr14:12634952-12634818 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 11-151 |
| Cow position: | chr14:18941356-18941221 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-151 |
| Cow position: | chr14:24387370-24387512 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 11-151 |
| Cow position: | chr14:33247500-33247364 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:33830231-33830366 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 11-151 |
| Cow position: | chr14:34399869-34399733 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:34449042-34448906 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:36425478-36425346 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-151 |
| Cow position: | chr14:36443089-36442953 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr14:37883987-37883851 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-151 |
| Cow position: | chr14:39037155-39037286 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 11-151 |
| Cow position: | chr14:42436954-42437088 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 11-152 |
| Cow position: | chr14:7695195-7695333 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 11-152 |
| Cow position: | chr14:19129435-19129572 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-152 |
| Cow position: | chr14:42419344-42419207 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 12-149 |
| Cow position: | chr14:34331396-34331263 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 12-150 |
| Cow position: | chr14:20712757-20712628 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 12-152 |
| Cow position: | chr14:1868453-1868317 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 12-152 |
| Cow position: | chr14:33309573-33309437 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 12-152 |
| Cow position: | chr14:36555216-36555089 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 13-151 |
| Cow position: | chr14:26097762-26097628 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 14-149 |
| Cow position: | chr14:25399001-25399134 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 20-152 |
| Cow position: | chr14:25403997-25403869 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 22-151 |
| Cow position: | chr14:49767403-49767528 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 101 |
Show alignments to all cow chromosomes.