Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 2-149
Cow position: chr16:8025732-8025875 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 109

Conread position: 4-125
Cow position: chr16:22327631-22327509 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 5-109
Cow position: chr16:7499170-7499065 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 5-127
Cow position: chr16:47852473-47852594 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 106

Conread position: 5-149
Cow position: chr16:11957457-11957598 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 107

Conread position: 5-149
Cow position: chr16:15905130-15905270 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 106

Conread position: 5-149
Cow position: chr16:28395961-28396101 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 106

Conread position: 5-150
Cow position: chr16:12939742-12939597 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 93

Conread position: 5-151
Cow position: chr16:7550088-7549946 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 106

Conread position: 5-151
Cow position: chr16:8933306-8933447 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 80

Conread position: 5-151
Cow position: chr16:14568370-14568511 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 12

Conread position: 5-151
Cow position: chr16:17283567-17283424 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 108

Conread position: 5-151
Cow position: chr16:18206080-18205938 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 107

Conread position: 5-151
Cow position: chr16:20025562-20025422 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 80

Conread position: 5-151
Cow position: chr16:20648034-20647900 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 62

Conread position: 5-151
Cow position: chr16:22804478-22804619 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 55, 106

Conread position: 5-151
Cow position: chr16:23955712-23955854 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 106

Conread position: 5-151
Cow position: chr16:42241998-42242139 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 5-151
Cow position: chr16:53508864-53509006 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 81

Conread position: 5-152
Cow position: chr16:4736467-4736607 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 5-152
Cow position: chr16:27723344-27723202 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 106

Conread position: 5-159
Cow position: chr16:35297523-35297376 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 39

Conread position: 6-125
Cow position: chr16:56670800-56670918 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 105

Conread position: 6-150
Cow position: chr16:18757720-18757858 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 107

Conread position: 6-150
Cow position: chr16:56665694-56665554 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 25

Conread position: 8-147
Cow position: chr16:14974427-14974558 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 79

Conread position: 8-149
Cow position: chr16:11391022-11390883 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 110

Conread position: 8-149
Cow position: chr16:54664682-54664820 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 79

Conread position: 8-151
Cow position: chr16:12501044-12501182 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 65

Conread position: 8-151
Cow position: chr16:21317476-21317615 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 103

Conread position: 10-127
Cow position: chr16:46552909-46552793 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 100

Conread position: 10-149
Cow position: chr16:4399850-4399715 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 101

Conread position: 10-150
Cow position: chr16:9958944-9958808 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 92

Conread position: 10-150
Cow position: chr16:22773094-22772958 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 99

Conread position: 10-151
Cow position: chr16:8438537-8438675 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 89

Conread position: 10-151
Cow position: chr16:18353843-18353978 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 89

Conread position: 10-151
Cow position: chr16:28444375-28444512 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr16:30036876-30037009 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 96

Conread position: 10-151
Cow position: chr16:39202254-39202118 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr16:42340311-42340174 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 101

Conread position: 10-151
Cow position: chr16:42432996-42433133 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 33

Conread position: 10-151
Cow position: chr16:48385288-48385421 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 77

Conread position: 10-156
Cow position: chr16:48448837-48448696 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 40

Conread position: 10-169
Cow position: chr16:51143914-51143752 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 108

Conread position: 11-103
Cow position: chr16:50569377-50569284 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 11-107
Cow position: chr16:9097137-9097040 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 11-107
Cow position: chr16:44568995-44568898 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-110
Cow position: chr16:4102717-4102817 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-110
Cow position: chr16:7611977-7611877 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 11-110
Cow position: chr16:33290498-33290398 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 11-110
Cow position: chr16:52705962-52706062 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 11-116
Cow position: chr16:15203255-15203361 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-118
Cow position: chr16:53086227-53086335 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 11-127
Cow position: chr16:34412922-34412808 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 77

Conread position: 11-127
Cow position: chr16:40745245-40745360 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-127
Cow position: chr16:45193695-45193810 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 11-131
Cow position: chr16:7928271-7928390 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 99

Conread position: 11-144
Cow position: chr16:12220795-12220666 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 99

Conread position: 11-146
Cow position: chr16:42633630-42633759 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 99

Conread position: 11-146
Cow position: chr16:50286626-50286496 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 95

Conread position: 11-148
Cow position: chr16:9596484-9596351 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 119
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 100

Conread position: 11-148
Cow position: chr16:13252196-13252325 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 76

Conread position: 11-149
Cow position: chr16:17135838-17135707 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 73

Conread position: 11-149
Cow position: chr16:48545935-48545801 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 99

Conread position: 11-150
Cow position: chr16:7665751-7665616 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 84

Conread position: 11-150
Cow position: chr16:8273724-8273859 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr16:9578378-9578512 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 11-150
Cow position: chr16:12097755-12097620 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr16:13698629-13698494 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 105

Conread position: 11-150
Cow position: chr16:29655439-29655304 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 102

Conread position: 11-150
Cow position: chr16:51697199-51697062 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 121
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 118

Conread position: 11-151
Cow position: chr16:6310587-6310723 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 113

Conread position: 11-151
Cow position: chr16:8065774-8065910 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr16:13414552-13414688 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr16:13712819-13712955 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr16:15960176-15960312 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 102

Conread position: 11-151
Cow position: chr16:25380381-25380518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 101

Conread position: 11-151
Cow position: chr16:25839734-25839598 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr16:30358949-30359085 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr16:32301892-32302029 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr16:33530523-33530387 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr16:38663597-38663732 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 66

Conread position: 11-151
Cow position: chr16:39165353-39165218 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr16:41530186-41530322 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 106

Conread position: 11-151
Cow position: chr16:43674988-43674851 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 98

Conread position: 11-151
Cow position: chr16:49169267-49169403 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr16:50282318-50282455 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 92

Conread position: 11-151
Cow position: chr16:54226486-54226619 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 73

Conread position: 11-152
Cow position: chr16:6319317-6319179 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 88

Conread position: 11-152
Cow position: chr16:9830558-9830422 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 48

Conread position: 11-152
Cow position: chr16:35188363-35188230 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 11-152
Cow position: chr16:45785851-45785714 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 11-169
Cow position: chr16:22329275-22329123 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-177
Cow position: chr16:12324569-12324409 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 99

Conread position: 12-122
Cow position: chr16:38355316-38355430 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 12-151
Cow position: chr16:8441694-8441829 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 103

Conread position: 12-151
Cow position: chr16:11083110-11082976 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 12-151
Cow position: chr16:46452630-46452765 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 98

Conread position: 12-151
Cow position: chr16:56796553-56796688 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 102

Conread position: 12-166
Cow position: chr16:7496368-7496219 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 32

Conread position: 13-150
Cow position: chr16:37452502-37452635 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 101

Conread position: 13-151
Cow position: chr16:11359263-11359129 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 100

Conread position: 14-152
Cow position: chr16:27160753-27160887 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 97

Conread position: 16-151
Cow position: chr16:55968546-55968420 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 19-151
Cow position: chr16:36120877-36121005 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 92

Show alignments to all cow chromosomes.