Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 2-152
Cow position: chr17:16158654-16158508 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 108

Conread position: 5-104
Cow position: chr17:10650274-10650173 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 5-110
Cow position: chr17:26789581-26789473 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 5-118
Cow position: chr17:35311688-35311580 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 5-127
Cow position: chr17:10508273-10508395 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 107

Conread position: 5-143
Cow position: chr17:34751245-34751379 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 99

Conread position: 5-145
Cow position: chr17:12591334-12591193 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 127

Conread position: 5-145
Cow position: chr17:24554157-24554020 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 106

Conread position: 5-148
Cow position: chr17:27292295-27292436 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 108

Conread position: 5-149
Cow position: chr17:22074338-22074478 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 105

Conread position: 5-149
Cow position: chr17:25126511-25126370 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 107

Conread position: 5-149
Cow position: chr17:32349228-32349091 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 83

Conread position: 5-150
Cow position: chr17:22056866-22057009 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 107

Conread position: 5-150
Cow position: chr17:31991092-31990952 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 39

Conread position: 5-151
Cow position: chr17:6329277-6329133 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 108

Conread position: 5-151
Cow position: chr17:12536305-12536447 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 105

Conread position: 5-151
Cow position: chr17:14003987-14003841 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 7, 126

Conread position: 5-151
Cow position: chr17:20874557-20874416 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 107

Conread position: 5-151
Cow position: chr17:20884685-20884541 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 108

Conread position: 5-151
Cow position: chr17:26730451-26730593 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 106

Conread position: 5-151
Cow position: chr17:34835948-34836090 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 106

Conread position: 5-151
Cow position: chr17:34836333-34836189 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 113

Conread position: 5-152
Cow position: chr17:11224259-11224121 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 72

Conread position: 5-152
Cow position: chr17:11831955-11832098 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 106

Conread position: 5-155
Cow position: chr17:15340592-15340740 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 124

Conread position: 5-160
Cow position: chr17:15684670-15684518 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 98

Conread position: 6-151
Cow position: chr17:8079471-8079330 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 104

Conread position: 6-151
Cow position: chr17:11280941-11281084 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 84

Conread position: 6-151
Cow position: chr17:21489466-21489605 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 107

Conread position: 7-151
Cow position: chr17:36814519-36814379 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 104

Conread position: 8-151
Cow position: chr17:30718261-30718400 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 103

Conread position: 8-151
Cow position: chr17:36864787-36864648 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 103

Conread position: 8-152
Cow position: chr17:6848951-6848814 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 77

Conread position: 8-152
Cow position: chr17:33913418-33913559 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 103

Conread position: 9-150
Cow position: chr17:36275489-36275352 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 106

Conread position: 9-152
Cow position: chr17:27058401-27058541 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 102

Conread position: 10-128
Cow position: chr17:3364748-3364629 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 78

Conread position: 10-151
Cow position: chr17:11215077-11215212 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 10-151
Cow position: chr17:27795808-27795666 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 34

Conread position: 11-123
Cow position: chr17:5344771-5344660 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 99

Conread position: 11-124
Cow position: chr17:969037-968926 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 66

Conread position: 11-125
Cow position: chr17:10825634-10825520 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 98

Conread position: 11-126
Cow position: chr17:20234365-20234251 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 100

Conread position: 11-127
Cow position: chr17:3291224-3291111 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 60

Conread position: 11-127
Cow position: chr17:24077555-24077442 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 72

Conread position: 11-127
Cow position: chr17:27303815-27303929 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 88

Conread position: 11-141
Cow position: chr17:21039711-21039585 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 98

Conread position: 11-142
Cow position: chr17:5743137-5743264 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 99

Conread position: 11-145
Cow position: chr17:1634338-1634468 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 99

Conread position: 11-147
Cow position: chr17:8108204-8108332 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 76

Conread position: 11-147
Cow position: chr17:14025756-14025889 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 101

Conread position: 11-147
Cow position: chr17:37430351-37430483 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 100

Conread position: 11-149
Cow position: chr17:5720025-5719891 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 11-149
Cow position: chr17:29245597-29245463 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 100

Conread position: 11-149
Cow position: chr17:35334249-35334115 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 100

Conread position: 11-149
Cow position: chr17:43957814-43957680 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr17:2275624-2275489 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr17:5900523-5900388 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr17:9911911-9911779 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 73

Conread position: 11-150
Cow position: chr17:9940849-9940710 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 120

Conread position: 11-150
Cow position: chr17:25193373-25193508 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr17:3067705-3067841 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr17:12289255-12289391 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 98

Conread position: 11-151
Cow position: chr17:17410447-17410311 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr17:18720293-18720429 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 98

Conread position: 11-151
Cow position: chr17:24862612-24862476 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr17:25467136-25467005 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 91

Conread position: 11-151
Cow position: chr17:25930386-25930521 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 34

Conread position: 11-151
Cow position: chr17:26072607-26072743 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 99

Conread position: 11-151
Cow position: chr17:28814339-28814475 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr17:40355412-40355276 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr17:40741805-40741666 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 24

Conread position: 11-152
Cow position: chr17:1469529-1469396 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 64

Conread position: 11-152
Cow position: chr17:20810336-20810471 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 24

Conread position: 11-152
Cow position: chr17:21680933-21680789 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 72

Conread position: 11-152
Cow position: chr17:21738720-21738857 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-152
Cow position: chr17:21922480-21922617 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 101

Conread position: 11-152
Cow position: chr17:32143240-32143105 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 99

Conread position: 11-152
Cow position: chr17:32989630-32989494 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 98

Conread position: 11-152
Cow position: chr17:32993470-32993606 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 98

Conread position: 12-110
Cow position: chr17:9078068-9078167 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 12-127
Cow position: chr17:7675002-7675116 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 99

Conread position: 12-151
Cow position: chr17:1492995-1493131 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 99

Conread position: 12-151
Cow position: chr17:21788506-21788641 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 99

Conread position: 12-151
Cow position: chr17:32138271-32138406 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 98

Conread position: 13-147
Cow position: chr17:20848674-20848545 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 86

Conread position: 13-151
Cow position: chr17:20992890-20993019 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 89

Conread position: 13-151
Cow position: chr17:38263338-38263472 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 98

Conread position: 13-151
Cow position: chr17:39715307-39715178 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.