Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 2-151
Cow position: chr19:11443102-11442955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 109

Conread position: 4-151
Cow position: chr19:12698429-12698286 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 107

Conread position: 5-106
Cow position: chr19:39698394-39698292 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-109
Cow position: chr19:21723600-21723705 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 5-110
Cow position: chr19:11816615-11816721 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 5-110
Cow position: chr19:33931749-33931856 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 5-116
Cow position: chr19:5522045-5522159 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 5-122
Cow position: chr19:55724295-55724411 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 105

Conread position: 5-125
Cow position: chr19:52356359-52356241 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 11

Conread position: 5-127
Cow position: chr19:31998163-31998286 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 107

Conread position: 5-147
Cow position: chr19:28037799-28037936 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 14

Conread position: 5-148
Cow position: chr19:35246052-35245911 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 107

Conread position: 5-149
Cow position: chr19:22134044-22134181 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 79

Conread position: 5-149
Cow position: chr19:52750648-52750790 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 108

Conread position: 5-150
Cow position: chr19:22153740-22153878 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 88

Conread position: 5-150
Cow position: chr19:30241808-30241666 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 107

Conread position: 5-150
Cow position: chr19:39613057-39613198 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 106

Conread position: 5-151
Cow position: chr19:729638-729776 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 86

Conread position: 5-151
Cow position: chr19:7404267-7404410 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 105

Conread position: 5-151
Cow position: chr19:21176633-21176775 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 19

Conread position: 5-151
Cow position: chr19:25526394-25526250 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 110

Conread position: 5-151
Cow position: chr19:32457751-32457608 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 68

Conread position: 5-151
Cow position: chr19:55590342-55590199 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 95

Conread position: 5-151
Cow position: chr19:56063321-56063463 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 106

Conread position: 7-110
Cow position: chr19:4586441-4586545 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 7-150
Cow position: chr19:54915585-54915725 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 105

Conread position: 7-151
Cow position: chr19:12747670-12747808 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 88

Conread position: 8-149
Cow position: chr19:4503325-4503191 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 76

Conread position: 8-151
Cow position: chr19:3217119-3216983 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 32

Conread position: 8-151
Cow position: chr19:25807202-25807334 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 73

Conread position: 8-152
Cow position: chr19:7637129-7637270 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 104

Conread position: 10-110
Cow position: chr19:52568372-52568473 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 10-116
Cow position: chr19:25927305-25927413 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 10-149
Cow position: chr19:2965643-2965510 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 10-151
Cow position: chr19:268457-268320 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 100

Conread position: 10-151
Cow position: chr19:25652657-25652790 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 80

Conread position: 10-151
Cow position: chr19:26975964-26976101 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr19:35540402-35540261 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 108

Conread position: 11-121
Cow position: chr19:14581464-14581356 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 74

Conread position: 11-121
Cow position: chr19:15076098-15076207 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 97

Conread position: 11-131
Cow position: chr19:29972154-29972276 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 105

Conread position: 11-143
Cow position: chr19:8185305-8185177 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-148
Cow position: chr19:39254343-39254476 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-149
Cow position: chr19:11424215-11424347 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 63

Conread position: 11-149
Cow position: chr19:28924859-28924725 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-149
Cow position: chr19:33241404-33241538 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 103

Conread position: 11-149
Cow position: chr19:33469123-33468989 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 100

Conread position: 11-149
Cow position: chr19:39361246-39361108 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 40

Conread position: 11-150
Cow position: chr19:8128407-8128272 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr19:18921140-18921280 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 121

Conread position: 11-150
Cow position: chr19:37466959-37467094 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr19:39622688-39622821 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 69

Conread position: 11-150
Cow position: chr19:47986961-47986826 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr19:2220973-2221109 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr19:5406603-5406466 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 108

Conread position: 11-151
Cow position: chr19:10081177-10081041 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr19:10970993-10971131 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 102

Conread position: 11-151
Cow position: chr19:13325383-13325519 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr19:16693929-16694066 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr19:20622756-20622620 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 114

Conread position: 11-151
Cow position: chr19:23088086-23087950 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr19:25382585-25382721 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr19:30471252-30471388 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr19:30886498-30886362 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 98

Conread position: 11-151
Cow position: chr19:33237276-33237140 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr19:34166469-34166337 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 82

Conread position: 11-151
Cow position: chr19:34757900-34758036 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr19:34819084-34819222 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 117

Conread position: 11-151
Cow position: chr19:35233558-35233687 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 11-151
Cow position: chr19:36845352-36845216 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr19:39648974-39649110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 74

Conread position: 11-151
Cow position: chr19:39781622-39781486 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr19:40051291-40051427 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr19:43373141-43373005 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 103

Conread position: 11-151
Cow position: chr19:43647519-43647379 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 104

Conread position: 11-151
Cow position: chr19:50682343-50682476 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 74

Conread position: 11-152
Cow position: chr19:1978283-1978137 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 125

Conread position: 11-152
Cow position: chr19:4800844-4800707 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 99

Conread position: 11-152
Cow position: chr19:6344175-6344039 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 11-152
Cow position: chr19:7675336-7675199 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 99

Conread position: 11-152
Cow position: chr19:9391049-9391186 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 100

Conread position: 11-152
Cow position: chr19:21817065-21816932 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 76

Conread position: 11-152
Cow position: chr19:23304388-23304523 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 102

Conread position: 11-152
Cow position: chr19:30227622-30227486 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 12-150
Cow position: chr19:39795291-39795157 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 99

Conread position: 12-151
Cow position: chr19:20670805-20670940 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 98

Conread position: 12-151
Cow position: chr19:22798976-22799111 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 98

Conread position: 12-151
Cow position: chr19:25410746-25410876 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 91

Conread position: 14-141
Cow position: chr19:30552116-30551993 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 97

Conread position: 14-184
Cow position: chr19:11866212-11866371 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 67

Conread position: 15-151
Cow position: chr19:53932226-53932357 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 27

Conread position: 19-150
Cow position: chr19:53497501-53497375 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 89

Conread position: 21-151
Cow position: chr19:31595393-31595267 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 90

Show alignments to all cow chromosomes.