Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 4-114
Cow position: chr20:13617389-13617277 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 5-126
Cow position: chr20:2316263-2316383 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 106

Conread position: 5-150
Cow position: chr20:354737-354876 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 88

Conread position: 5-150
Cow position: chr20:7441976-7442111 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 21

Conread position: 5-151
Cow position: chr20:6603204-6603063 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 109

Conread position: 5-151
Cow position: chr20:17846122-17845981 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 104

Conread position: 5-151
Cow position: chr20:20056324-20056464 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 70

Conread position: 5-151
Cow position: chr20:29805495-29805638 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 109

Conread position: 5-151
Cow position: chr20:33067198-33067340 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 105

Conread position: 5-151
Cow position: chr20:34202799-34202654 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 108

Conread position: 5-152
Cow position: chr20:34097789-34097937 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 8, 127

Conread position: 6-106
Cow position: chr20:26059067-26059170 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 6-150
Cow position: chr20:11359472-11359610 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 10

Conread position: 6-151
Cow position: chr20:40782122-40781981 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 105

Conread position: 8-127
Cow position: chr20:21941593-21941475 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 103

Conread position: 8-145
Cow position: chr20:36207973-36207834 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 8-150
Cow position: chr20:9433746-9433608 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 103

Conread position: 8-151
Cow position: chr20:11481976-11482114 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 34

Conread position: 8-151
Cow position: chr20:20934572-20934712 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 104

Conread position: 10-108
Cow position: chr20:38934898-38934997 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 10-118
Cow position: chr20:34108262-34108153 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 10-147
Cow position: chr20:11135596-11135737 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 108

Conread position: 10-147
Cow position: chr20:28899257-28899118 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 122

Conread position: 10-149
Cow position: chr20:13652210-13652345 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 103

Conread position: 10-150
Cow position: chr20:35591492-35591627 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 86

Conread position: 10-150
Cow position: chr20:41471257-41471121 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr20:1824471-1824610 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 118

Conread position: 10-151
Cow position: chr20:28594444-28594303 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 79

Conread position: 11-102
Cow position: chr20:15515284-15515376 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 11-110
Cow position: chr20:2823026-2822926 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 11-120
Cow position: chr20:8021282-8021174 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-121
Cow position: chr20:23936029-23936137 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 11-122
Cow position: chr20:7622827-7622937 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 11-125
Cow position: chr20:35442126-35442239 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-127
Cow position: chr20:32847501-32847386 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 99

Conread position: 11-137
Cow position: chr20:15846911-15846786 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 110

Conread position: 11-146
Cow position: chr20:14100279-14100408 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 86

Conread position: 11-146
Cow position: chr20:41627185-41627318 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 12

Conread position: 11-147
Cow position: chr20:12995850-12995981 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 11-147
Cow position: chr20:19751463-19751331 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 91

Conread position: 11-148
Cow position: chr20:23870663-23870795 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-148
Cow position: chr20:39728607-39728473 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 99

Conread position: 11-149
Cow position: chr20:11008326-11008192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-149
Cow position: chr20:14283076-14282942 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 100

Conread position: 11-149
Cow position: chr20:21372464-21372330 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-149
Cow position: chr20:22959192-22959324 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 11-149
Cow position: chr20:31323943-31323810 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 76

Conread position: 11-149
Cow position: chr20:33435004-33435142 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 29

Conread position: 11-150
Cow position: chr20:361034-361165 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 65

Conread position: 11-150
Cow position: chr20:580764-580899 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 102

Conread position: 11-150
Cow position: chr20:1139612-1139746 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 64

Conread position: 11-150
Cow position: chr20:6054353-6054488 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr20:12126148-12126283 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 99

Conread position: 11-150
Cow position: chr20:15568793-15568928 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr20:4945098-4945231 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 63

Conread position: 11-151
Cow position: chr20:6248445-6248581 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr20:12239527-12239661 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 73

Conread position: 11-151
Cow position: chr20:14917441-14917305 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr20:15589199-15589061 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 117

Conread position: 11-151
Cow position: chr20:16941132-16941267 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 94

Conread position: 11-151
Cow position: chr20:17251873-17251738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 97

Conread position: 11-151
Cow position: chr20:20898434-20898570 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 105

Conread position: 11-151
Cow position: chr20:20967477-20967341 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 101

Conread position: 11-151
Cow position: chr20:21345589-21345449 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 120

Conread position: 11-151
Cow position: chr20:23590593-23590727 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 98

Conread position: 11-151
Cow position: chr20:34777336-34777200 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 11-152
Cow position: chr20:5703628-5703490 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 100

Conread position: 11-152
Cow position: chr20:7709625-7709761 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-153
Cow position: chr20:9537288-9537157 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 74

Conread position: 11-155
Cow position: chr20:7417011-7417152 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 99

Conread position: 12-149
Cow position: chr20:6096340-6096473 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 99

Conread position: 12-150
Cow position: chr20:35727775-35727909 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 99

Conread position: 12-151
Cow position: chr20:15565674-15565807 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 57

Conread position: 12-151
Cow position: chr20:16492228-16492092 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 100

Conread position: 13-149
Cow position: chr20:40158054-40157922 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 98

Conread position: 13-150
Cow position: chr20:23678561-23678696 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 99

Conread position: 13-151
Cow position: chr20:22485013-22484882 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 100

Conread position: 14-152
Cow position: chr20:13025457-13025595 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 117

Conread position: 16-150
Cow position: chr20:14759514-14759644 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 95

Conread position: 17-151
Cow position: chr20:33438830-33438960 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 94

Show alignments to all cow chromosomes.