Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 2-145
Cow position: chr22:25742830-25742969 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 108

Conread position: 4-151
Cow position: chr22:32188737-32188880 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 106

Conread position: 5-107
Cow position: chr22:27052617-27052720 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 5-110
Cow position: chr22:30687142-30687036 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 5-110
Cow position: chr22:35533120-35533222 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 82

Conread position: 5-114
Cow position: chr22:2516791-2516901 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 5-122
Cow position: chr22:8331116-8330996 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 5-124
Cow position: chr22:3997869-3997751 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 106

Conread position: 5-127
Cow position: chr22:2876682-2876803 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 105

Conread position: 5-130
Cow position: chr22:23397859-23397983 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 5-135
Cow position: chr22:11468491-11468359 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 128

Conread position: 5-147
Cow position: chr22:1911782-1911643 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 106

Conread position: 5-150
Cow position: chr22:1849190-1849049 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 97

Conread position: 5-150
Cow position: chr22:23398286-23398429 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 108

Conread position: 5-150
Cow position: chr22:27741006-27740867 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 107

Conread position: 5-150
Cow position: chr22:28665399-28665258 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 106

Conread position: 5-151
Cow position: chr22:1106185-1106041 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 108

Conread position: 5-151
Cow position: chr22:3965302-3965160 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 105

Conread position: 5-151
Cow position: chr22:4156701-4156843 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 106

Conread position: 5-151
Cow position: chr22:12967952-12968095 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 56

Conread position: 5-151
Cow position: chr22:18926474-18926330 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 108

Conread position: 5-151
Cow position: chr22:35029384-35029243 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 5-151
Cow position: chr22:41854025-41853879 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 119

Conread position: 5-152
Cow position: chr22:44410837-44410693 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 106

Conread position: 5-171
Cow position: chr22:28120840-28120675 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 126

Conread position: 6-151
Cow position: chr22:28146791-28146650 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 105

Conread position: 8-151
Cow position: chr22:8090419-8090554 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 72

Conread position: 8-151
Cow position: chr22:27328778-27328918 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 108

Conread position: 9-149
Cow position: chr22:4075774-4075911 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 112

Conread position: 10-149
Cow position: chr22:10752431-10752566 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 100

Conread position: 10-150
Cow position: chr22:12188370-12188505 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 101

Conread position: 10-150
Cow position: chr22:12195457-12195592 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr22:27828489-27828352 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr22:47555959-47555825 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 101

Conread position: 10-151
Cow position: chr22:47562816-47562677 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 119

Conread position: 10-152
Cow position: chr22:7165074-7164935 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 101

Conread position: 10-152
Cow position: chr22:28672256-28672118 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 101

Conread position: 11-109
Cow position: chr22:26316566-26316467 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-111
Cow position: chr22:45683929-45684030 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 11-120
Cow position: chr22:12777267-12777375 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-122
Cow position: chr22:1830158-1830047 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 98

Conread position: 11-122
Cow position: chr22:12599481-12599371 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-123
Cow position: chr22:14509367-14509480 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-125
Cow position: chr22:2704408-2704295 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 100

Conread position: 11-149
Cow position: chr22:9372631-9372497 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 91

Conread position: 11-149
Cow position: chr22:10303126-10302992 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr22:3950362-3950227 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 70

Conread position: 11-150
Cow position: chr22:5595701-5595834 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 74

Conread position: 11-150
Cow position: chr22:5712696-5712563 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr22:10286080-10285943 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 34

Conread position: 11-150
Cow position: chr22:16845294-16845429 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 98

Conread position: 11-150
Cow position: chr22:23176331-23176466 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 105

Conread position: 11-150
Cow position: chr22:40120771-40120901 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 11-151
Cow position: chr22:534609-534473 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 109

Conread position: 11-151
Cow position: chr22:877625-877489 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr22:2627690-2627550 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 101

Conread position: 11-151
Cow position: chr22:6326554-6326418 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr22:8287293-8287161 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 76

Conread position: 11-151
Cow position: chr22:8883121-8882989 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 97

Conread position: 11-151
Cow position: chr22:10553575-10553711 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr22:12389209-12389073 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr22:12678312-12678448 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr22:12749791-12749927 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 99

Conread position: 11-151
Cow position: chr22:13222227-13222089 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 70

Conread position: 11-151
Cow position: chr22:14690861-14690997 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr22:14924622-14924758 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 112

Conread position: 11-151
Cow position: chr22:15025000-15025136 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 104

Conread position: 11-151
Cow position: chr22:16044306-16044442 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr22:17198248-17198112 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 100

Conread position: 11-151
Cow position: chr22:23121892-23122032 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 120

Conread position: 11-151
Cow position: chr22:24032105-24032241 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr22:24610984-24611118 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 11-151
Cow position: chr22:24915947-24915809 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 103

Conread position: 11-151
Cow position: chr22:28057940-28058077 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr22:32698870-32698738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 80

Conread position: 11-152
Cow position: chr22:3301229-3301366 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 100

Conread position: 11-152
Cow position: chr22:23857156-23857019 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 99

Conread position: 11-152
Cow position: chr22:45505895-45506034 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 80

Conread position: 11-156
Cow position: chr22:23265542-23265684 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 100

Conread position: 11-159
Cow position: chr22:4736133-4735989 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 100

Conread position: 12-110
Cow position: chr22:17294827-17294926 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 12-146
Cow position: chr22:21530250-21530381 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 100

Conread position: 12-150
Cow position: chr22:27274591-27274723 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 98

Conread position: 12-151
Cow position: chr22:2502935-2502800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 88

Conread position: 12-151
Cow position: chr22:7832245-7832380 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 98

Conread position: 12-151
Cow position: chr22:18933605-18933742 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 101

Conread position: 12-151
Cow position: chr22:25943584-25943449 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 99

Conread position: 12-151
Cow position: chr22:30515367-30515229 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 115

Conread position: 12-152
Cow position: chr22:13769586-13769444 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 123

Conread position: 13-149
Cow position: chr22:25540107-25539975 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 99

Conread position: 13-150
Cow position: chr22:17814340-17814208 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 74

Conread position: 13-150
Cow position: chr22:20846964-20846829 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 116

Conread position: 13-151
Cow position: chr22:14372278-14372153 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 89

Conread position: 13-151
Cow position: chr22:38977949-38977817 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 98

Conread position: 14-130
Cow position: chr22:10402839-10402954 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 97

Conread position: 15-151
Cow position: chr22:28704290-28704158 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 95

Conread position: 21-151
Cow position: chr22:18293665-18293789 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 92

Show alignments to all cow chromosomes.