Cow genome map
| Conread name: | rfbs3925b_b18.y1 |
| Conread position: | 5-107 |
| Cow position: | chr23:18417214-18417111 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-108 |
| Cow position: | chr23:1480761-1480657 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-108 |
| Cow position: | chr23:17012617-17012721 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-127 |
| Cow position: | chr23:24779419-24779542 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 5-127 |
| Cow position: | chr23:26986150-26986270 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 5-140 |
| Cow position: | chr23:32621409-32621274 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 110 |
| Conread position: | 5-150 |
| Cow position: | chr23:14569379-14569520 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-150 |
| Cow position: | chr23:21336361-21336503 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 5-150 |
| Cow position: | chr23:29069319-29069460 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 5-151 |
| Cow position: | chr23:38151-38001 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 5-151 |
| Cow position: | chr23:360566-360710 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 5-151 |
| Cow position: | chr23:13946159-13946018 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 5-151 |
| Cow position: | chr23:14164273-14164418 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 7-150 |
| Cow position: | chr23:24479843-24479981 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 8-123 |
| Cow position: | chr23:38992971-38993086 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 10-124 |
| Cow position: | chr23:35930067-35929954 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 10-147 |
| Cow position: | chr23:27790133-27790001 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 10-148 |
| Cow position: | chr23:41348507-41348641 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 10-150 |
| Cow position: | chr23:24704407-24704265 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 10-151 |
| Cow position: | chr23:19774885-19774748 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 10-151 |
| Cow position: | chr23:23904211-23904348 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 10-151 |
| Cow position: | chr23:35247484-35247347 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 11-98 |
| Cow position: | chr23:5386975-5387063 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-120 |
| Cow position: | chr23:22530323-22530431 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-122 |
| Cow position: | chr23:18697910-18698022 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-125 |
| Cow position: | chr23:1798226-1798113 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-126 |
| Cow position: | chr23:3105000-3104886 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-127 |
| Cow position: | chr23:38845715-38845599 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 11-142 |
| Cow position: | chr23:5686506-5686633 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-147 |
| Cow position: | chr23:18739348-18739481 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 11-149 |
| Cow position: | chr23:306638-306504 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-149 |
| Cow position: | chr23:307571-307437 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-149 |
| Cow position: | chr23:3244353-3244487 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 11-149 |
| Cow position: | chr23:9734524-9734392 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 11-149 |
| Cow position: | chr23:16447573-16447705 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 11-149 |
| Cow position: | chr23:16699926-16700060 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr23:1656010-1655875 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-150 |
| Cow position: | chr23:1701287-1701152 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-150 |
| Cow position: | chr23:4972881-4972747 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 11-150 |
| Cow position: | chr23:5436527-5436662 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-150 |
| Cow position: | chr23:22804840-22804705 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr23:32479902-32480045 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 11-151 |
| Cow position: | chr23:1759362-1759227 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 11-151 |
| Cow position: | chr23:6994867-6995003 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr23:7574509-7574641 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 11-151 |
| Cow position: | chr23:14895558-14895694 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr23:20434948-20435085 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 11-151 |
| Cow position: | chr23:21309297-21309432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 11-151 |
| Cow position: | chr23:26283838-26283704 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-151 |
| Cow position: | chr23:34356756-34356621 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-152 |
| Cow position: | chr23:57046-57185 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 11-152 |
| Cow position: | chr23:1397923-1398060 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 11-152 |
| Cow position: | chr23:4104511-4104377 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 11-152 |
| Cow position: | chr23:4877476-4877339 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-152 |
| Cow position: | chr23:13673916-13674053 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-152 |
| Cow position: | chr23:20557729-20557867 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-159 |
| Cow position: | chr23:3835480-3835622 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 11-163 |
| Cow position: | chr23:35656523-35656380 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 12-120 |
| Cow position: | chr23:25726313-25726204 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 12-151 |
| Cow position: | chr23:12091242-12091381 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 12-151 |
| Cow position: | chr23:15743205-15743071 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 12-151 |
| Cow position: | chr23:18402175-18402310 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 12-151 |
| Cow position: | chr23:23409847-23409713 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 12-151 |
| Cow position: | chr23:40781444-40781310 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 12-153 |
| Cow position: | chr23:4054332-4054194 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 13-155 |
| Cow position: | chr23:21438611-21438469 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 14-151 |
| Cow position: | chr23:30655701-30655830 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 76 |
Show alignments to all cow chromosomes.