Cow genome map
| Conread name: | rfbs3925b_b18.y1 |
| Conread position: | 5-108 |
| Cow position: | chr24:36286664-36286560 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-129 |
| Cow position: | chr24:41412200-41412328 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 5-149 |
| Cow position: | chr24:39910937-39911079 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 5-150 |
| Cow position: | chr24:3493979-3493838 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 5-151 |
| Cow position: | chr24:11840280-11840140 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 5-151 |
| Cow position: | chr24:28326985-28327126 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 5-151 |
| Cow position: | chr24:29673617-29673475 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 5-152 |
| Cow position: | chr24:28721981-28721841 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 6-115 |
| Cow position: | chr24:162096-161987 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 8-108 |
| Cow position: | chr24:13058114-13058014 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 8-149 |
| Cow position: | chr24:29679221-29679355 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 8-150 |
| Cow position: | chr24:20969571-20969708 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 8-151 |
| Cow position: | chr24:27418012-27418145 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-152 |
| Cow position: | chr24:29063568-29063705 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 8-152 |
| Cow position: | chr24:29389326-29389183 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 10-123 |
| Cow position: | chr24:32230416-32230530 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 10-151 |
| Cow position: | chr24:22647252-22647390 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 10-152 |
| Cow position: | chr24:29171051-29170914 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 11-107 |
| Cow position: | chr24:39218463-39218560 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-109 |
| Cow position: | chr24:256115-256016 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-110 |
| Cow position: | chr24:873537-873437 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-110 |
| Cow position: | chr24:7113311-7113211 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 11-110 |
| Cow position: | chr24:22235556-22235456 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-118 |
| Cow position: | chr24:27553183-27553076 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-123 |
| Cow position: | chr24:21623311-21623197 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 11-125 |
| Cow position: | chr24:5152612-5152499 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-127 |
| Cow position: | chr24:32890955-32891070 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-135 |
| Cow position: | chr24:34301950-34302070 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 11-145 |
| Cow position: | chr24:19187026-19186901 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 11-149 |
| Cow position: | chr24:16895349-16895482 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 11-149 |
| Cow position: | chr24:18313844-18313985 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 11-149 |
| Cow position: | chr24:44987286-44987420 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 11-150 |
| Cow position: | chr24:6102916-6102784 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 11-151 |
| Cow position: | chr24:2992793-2992926 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 11-151 |
| Cow position: | chr24:16510066-16509923 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-151 |
| Cow position: | chr24:17955356-17955491 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 11-151 |
| Cow position: | chr24:18615089-18614954 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 11-151 |
| Cow position: | chr24:27290960-27290824 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr24:28470591-28470727 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr24:33944490-33944355 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-151 |
| Cow position: | chr24:34008484-34008620 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr24:34742842-34742705 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 11-151 |
| Cow position: | chr24:35150607-35150475 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 11-151 |
| Cow position: | chr24:39523360-39523496 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-159 |
| Cow position: | chr24:34465417-34465560 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 91 |
| Conread position: | 12-108 |
| Cow position: | chr24:32818215-32818309 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 12-120 |
| Cow position: | chr24:28024367-28024260 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 12-127 |
| Cow position: | chr24:14786467-14786353 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 12-146 |
| Cow position: | chr24:19637677-19637540 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 12-149 |
| Cow position: | chr24:41405982-41405845 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 13-151 |
| Cow position: | chr24:15373492-15373358 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 20-151 |
| Cow position: | chr24:8886990-8886861 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 21-151 |
| Cow position: | chr24:29538427-29538558 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 93 |
Show alignments to all cow chromosomes.