Cow genome map
| Conread name: | rfbs3925b_b18.y1 |
| Conread position: | 2-141 |
| Cow position: | chr25:10791693-10791829 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 4-151 |
| Cow position: | chr25:28187827-28187969 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 5-120 |
| Cow position: | chr25:23323607-23323491 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-126 |
| Cow position: | chr25:18551217-18551340 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 5-149 |
| Cow position: | chr25:26224912-26225052 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 5-150 |
| Cow position: | chr25:14513232-14513090 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 5-150 |
| Cow position: | chr25:26087640-26087495 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 5-150 |
| Cow position: | chr25:34241986-34242128 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 5-151 |
| Cow position: | chr25:9269460-9269323 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 5-151 |
| Cow position: | chr25:11956920-11956779 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 5-151 |
| Cow position: | chr25:18988500-18988365 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-151 |
| Cow position: | chr25:36762222-36762079 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 5-152 |
| Cow position: | chr25:14196980-14196835 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 5-152 |
| Cow position: | chr25:21893456-21893312 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 6-112 |
| Cow position: | chr25:7277210-7277316 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 6-149 |
| Cow position: | chr25:36840511-36840373 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-143 |
| Cow position: | chr25:7380723-7380856 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 105 |
| Conread position: | 7-150 |
| Cow position: | chr25:9002785-9002648 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 8-109 |
| Cow position: | chr25:11857871-11857975 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 10-123 |
| Cow position: | chr25:31732209-31732322 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 10-151 |
| Cow position: | chr25:13503546-13503408 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 10-151 |
| Cow position: | chr25:22750895-22751032 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 11-120 |
| Cow position: | chr25:23016131-23016021 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-122 |
| Cow position: | chr25:36369929-36369820 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-122 |
| Cow position: | chr25:36375620-36375511 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-127 |
| Cow position: | chr25:36872945-36873060 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-128 |
| Cow position: | chr25:33100686-33100568 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 11-147 |
| Cow position: | chr25:15218243-15218115 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 11-148 |
| Cow position: | chr25:432937-433070 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 11-149 |
| Cow position: | chr25:4009204-4009070 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-150 |
| Cow position: | chr25:21267098-21266967 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 11-151 |
| Cow position: | chr25:6473976-6474112 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 11-151 |
| Cow position: | chr25:7581316-7581455 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 11-151 |
| Cow position: | chr25:12840607-12840748 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr25:17474402-17474537 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 11-151 |
| Cow position: | chr25:17658722-17658586 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr25:17704855-17704719 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-151 |
| Cow position: | chr25:18564597-18564462 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 11-151 |
| Cow position: | chr25:18905996-18905860 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 11-151 |
| Cow position: | chr25:20008244-20008107 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 11-151 |
| Cow position: | chr25:22730939-22730804 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 11-151 |
| Cow position: | chr25:30619174-30619039 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 11-151 |
| Cow position: | chr25:35109158-35109294 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-152 |
| Cow position: | chr25:4221492-4221630 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 11-152 |
| Cow position: | chr25:10504230-10504363 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 11-152 |
| Cow position: | chr25:11585629-11585492 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 11-152 |
| Cow position: | chr25:13272680-13272543 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 11-152 |
| Cow position: | chr25:21894774-21894910 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 11-152 |
| Cow position: | chr25:35090458-35090600 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 11-152 |
| Cow position: | chr25:36120609-36120471 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 12-151 |
| Cow position: | chr25:1838351-1838212 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 12-151 |
| Cow position: | chr25:26161079-26160940 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 13-108 |
| Cow position: | chr25:7403232-7403328 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-151 |
| Cow position: | chr25:30656542-30656671 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 69 |
Show alignments to all cow chromosomes.