Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 2-151
Cow position: chr28:26922241-26922386 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 109

Conread position: 5-108
Cow position: chr28:11365403-11365507 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 28

Conread position: 5-116
Cow position: chr28:13448247-13448135 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 5-124
Cow position: chr28:11411410-11411530 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 5-125
Cow position: chr28:2743206-2743086 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 107

Conread position: 5-149
Cow position: chr28:19216945-19216806 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 82

Conread position: 5-149
Cow position: chr28:21008541-21008681 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 73

Conread position: 5-150
Cow position: chr28:20397245-20397387 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 125
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 12, 107

Conread position: 5-151
Cow position: chr28:5144395-5144539 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 108

Conread position: 5-151
Cow position: chr28:8149506-8149650 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 107

Conread position: 5-151
Cow position: chr28:11866539-11866683 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 108

Conread position: 5-151
Cow position: chr28:23410197-23410343 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 109

Conread position: 5-151
Cow position: chr28:26719467-26719325 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 106

Conread position: 5-152
Cow position: chr28:1632533-1632671 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 97

Conread position: 5-152
Cow position: chr28:20313401-20313258 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 106

Conread position: 6-148
Cow position: chr28:13048161-13048298 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 109

Conread position: 8-149
Cow position: chr28:26982617-26982754 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 96

Conread position: 8-151
Cow position: chr28:5817963-5817822 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 121

Conread position: 8-151
Cow position: chr28:7805301-7805439 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 102

Conread position: 9-151
Cow position: chr28:3078562-3078699 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 10-127
Cow position: chr28:26784123-26784238 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 32

Conread position: 10-127
Cow position: chr28:29041935-29042051 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 101

Conread position: 10-147
Cow position: chr28:7156956-7156823 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 101

Conread position: 10-150
Cow position: chr28:7008859-7008995 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 101

Conread position: 10-151
Cow position: chr28:12951536-12951405 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 84

Conread position: 10-151
Cow position: chr28:19222032-19222168 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 100

Conread position: 10-151
Cow position: chr28:28765785-28765921 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 9

Conread position: 10-152
Cow position: chr28:662227-662087 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 103

Conread position: 11-119
Cow position: chr28:16692041-16691932 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 11-121
Cow position: chr28:9418848-9418959 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 11-123
Cow position: chr28:20046669-20046560 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 63

Conread position: 11-125
Cow position: chr28:4022791-4022678 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-126
Cow position: chr28:5152719-5152605 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 11-127
Cow position: chr28:5441781-5441894 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 56

Conread position: 11-127
Cow position: chr28:19038901-19039016 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 100

Conread position: 11-138
Cow position: chr28:7498029-7498153 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 103

Conread position: 11-150
Cow position: chr28:2752376-2752511 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr28:3143760-3143892 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 78

Conread position: 11-150
Cow position: chr28:4013202-4013067 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 99

Conread position: 11-150
Cow position: chr28:4307779-4307916 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr28:5166885-5166751 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 74

Conread position: 11-150
Cow position: chr28:12933612-12933751 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 119

Conread position: 11-151
Cow position: chr28:2819893-2819757 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr28:2899107-2898971 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr28:3011152-3011287 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 70

Conread position: 11-151
Cow position: chr28:3726091-3726229 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 118

Conread position: 11-151
Cow position: chr28:4643652-4643788 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr28:4765794-4765656 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 101

Conread position: 11-151
Cow position: chr28:5204313-5204177 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 99

Conread position: 11-151
Cow position: chr28:6059352-6059488 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr28:7697864-7697996 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 11-151
Cow position: chr28:10053207-10053347 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 118

Conread position: 11-151
Cow position: chr28:11559514-11559650 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 109

Conread position: 11-151
Cow position: chr28:17601436-17601572 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr28:23047736-23047602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 85

Conread position: 11-151
Cow position: chr28:25399986-25399855 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 40

Conread position: 11-151
Cow position: chr28:26743744-26743608 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 98

Conread position: 11-151
Cow position: chr28:27161209-27161344 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 11-151
Cow position: chr28:32174747-32174611 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 98

Conread position: 11-151
Cow position: chr28:34230346-34230210 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 100

Conread position: 11-152
Cow position: chr28:4881122-4881259 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 100

Conread position: 11-152
Cow position: chr28:29434310-29434447 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 104

Conread position: 11-175
Cow position: chr28:25677223-25677383 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 94

Conread position: 12-98
Cow position: chr28:26269503-26269416 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 12-150
Cow position: chr28:10615829-10615963 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 99

Conread position: 12-151
Cow position: chr28:21355348-21355214 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 99

Conread position: 14-149
Cow position: chr28:5867836-5867711 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 96

Conread position: 16-149
Cow position: chr28:32365956-32365828 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 11

Conread position: 17-124
Cow position: chr28:16389018-16388912 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 94

Conread position: 22-162
Cow position: chr28:19345357-19345221 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 46

Show alignments to all cow chromosomes.