Cow genome map

Conread name: rfbs3925b_b18.y1

Conread position: 4-117
Cow position: chr4:12867217-12867104 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 72

Conread position: 5-118
Cow position: chr4:32272861-32272975 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 83

Conread position: 5-118
Cow position: chr4:58389130-58389244 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 5-127
Cow position: chr4:61268304-61268182 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 106

Conread position: 5-127
Cow position: chr4:61608851-61608974 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 108
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 108

Conread position: 5-139
Cow position: chr4:43865743-43865880 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 130

Conread position: 5-148
Cow position: chr4:36731302-36731163 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 104

Conread position: 5-149
Cow position: chr4:6093954-6094094 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 52

Conread position: 5-149
Cow position: chr4:16881248-16881393 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 113

Conread position: 5-150
Cow position: chr4:1983-1842 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 115

Conread position: 5-150
Cow position: chr4:38999535-38999391 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 111

Conread position: 5-151
Cow position: chr4:19199173-19199317 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 116

Conread position: 5-151
Cow position: chr4:19709053-19708903 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 123

Conread position: 5-151
Cow position: chr4:20147295-20147153 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 106

Conread position: 5-151
Cow position: chr4:29384123-29384262 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 85

Conread position: 5-151
Cow position: chr4:39458763-39458611 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 105

Conread position: 5-151
Cow position: chr4:45563860-45563712 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 114

Conread position: 5-151
Cow position: chr4:46455955-46456095 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 87

Conread position: 5-151
Cow position: chr4:65650021-65650160 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 109

Conread position: 5-152
Cow position: chr4:47038881-47038736 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 108

Conread position: 6-152
Cow position: chr4:45706150-45706012 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 84

Conread position: 7-136
Cow position: chr4:18095564-18095691 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 104

Conread position: 7-151
Cow position: chr4:61926582-61926720 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 8-127
Cow position: chr4:21874911-21874793 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 103

Conread position: 8-147
Cow position: chr4:19456578-19456713 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 103

Conread position: 8-149
Cow position: chr4:35638794-35638931 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 103

Conread position: 9-147
Cow position: chr4:16594190-16594058 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 99

Conread position: 10-123
Cow position: chr4:42374049-42374162 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 110

Conread position: 10-127
Cow position: chr4:42044868-42044986 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 112

Conread position: 10-127
Cow position: chr4:65265199-65265315 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 101

Conread position: 10-150
Cow position: chr4:45367846-45367710 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 99

Conread position: 10-150
Cow position: chr4:45685564-45685428 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 106

Conread position: 10-150
Cow position: chr4:66547661-66547797 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 100

Conread position: 10-151
Cow position: chr4:508802-508939 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 99

Conread position: 10-151
Cow position: chr4:10732330-10732193 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 101

Conread position: 10-151
Cow position: chr4:12135819-12135957 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 101

Conread position: 10-151
Cow position: chr4:19324081-19323944 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 100

Conread position: 10-151
Cow position: chr4:37732376-37732513 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 100

Conread position: 10-151
Cow position: chr4:37935178-37935315 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 105

Conread position: 10-151
Cow position: chr4:51784286-51784150 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 10-152
Cow position: chr4:26401062-26400926 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 71

Conread position: 10-159
Cow position: chr4:46702551-46702697 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 101

Conread position: 11-105
Cow position: chr4:33870180-33870085 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-110
Cow position: chr4:30845477-30845377 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-110
Cow position: chr4:56805282-56805186 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 70

Conread position: 11-113
Cow position: chr4:54543558-54543661 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 11-118
Cow position: chr4:5047040-5047148 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 11-120
Cow position: chr4:30769140-30769033 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 11-122
Cow position: chr4:19561894-19561782 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 11-124
Cow position: chr4:47230892-47231006 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 11-124
Cow position: chr4:47283907-47284021 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 11-127
Cow position: chr4:8083692-8083808 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 106

Conread position: 11-127
Cow position: chr4:17790186-17790301 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-127
Cow position: chr4:19496600-19496485 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 11-127
Cow position: chr4:53819580-53819695 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 100

Conread position: 11-145
Cow position: chr4:22546736-22546865 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 40

Conread position: 11-149
Cow position: chr4:42231918-42232051 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 79

Conread position: 11-149
Cow position: chr4:45636272-45636138 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr4:1495303-1495431 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 11-150
Cow position: chr4:15462145-15462282 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 86

Conread position: 11-150
Cow position: chr4:19102776-19102910 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 11-150
Cow position: chr4:33181650-33181515 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 100

Conread position: 11-150
Cow position: chr4:50687760-50687890 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 11-151
Cow position: chr4:8705100-8704962 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr4:13941562-13941430 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 79

Conread position: 11-151
Cow position: chr4:19098578-19098439 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 105

Conread position: 11-151
Cow position: chr4:22138115-22138252 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr4:24481567-24481701 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 24

Conread position: 11-151
Cow position: chr4:25879496-25879367 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 78

Conread position: 11-151
Cow position: chr4:32693894-32693757 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 92

Conread position: 11-151
Cow position: chr4:32726330-32726194 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr4:37675719-37675588 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 79

Conread position: 11-151
Cow position: chr4:38946321-38946181 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 79

Conread position: 11-151
Cow position: chr4:44772937-44773073 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr4:44782480-44782345 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 49

Conread position: 11-151
Cow position: chr4:45626522-45626657 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 34

Conread position: 11-151
Cow position: chr4:45775232-45775368 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 98

Conread position: 11-151
Cow position: chr4:50676067-50676200 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 73

Conread position: 11-151
Cow position: chr4:51920650-51920514 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 100

Conread position: 11-151
Cow position: chr4:52823296-52823440 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 99

Conread position: 11-151
Cow position: chr4:56570912-56570776 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr4:59378015-59377879 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr4:61313107-61313243 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 100

Conread position: 11-151
Cow position: chr4:65950760-65950625 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 33

Conread position: 11-152
Cow position: chr4:13222081-13222216 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 91

Conread position: 11-152
Cow position: chr4:30792074-30791939 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 11-152
Cow position: chr4:67393197-67393063 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 101

Conread position: 11-158
Cow position: chr4:13919083-13918945 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 80

Conread position: 11-160
Cow position: chr4:54937187-54937038 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 125

Conread position: 12-103
Cow position: chr4:45840503-45840411 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 12-108
Cow position: chr4:46761712-46761615 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 12-110
Cow position: chr4:30691108-30691010 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 76

Conread position: 12-127
Cow position: chr4:10999610-10999724 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 100

Conread position: 12-143
Cow position: chr4:27699136-27699010 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 99

Conread position: 12-149
Cow position: chr4:23444942-23445074 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 33

Conread position: 12-150
Cow position: chr4:12591109-12591243 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 99

Conread position: 12-151
Cow position: chr4:21017-20882 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 99

Conread position: 12-151
Cow position: chr4:53126216-53126084 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 12-151
Cow position: chr4:65175040-65175175 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 99

Conread position: 12-152
Cow position: chr4:46591772-46591636 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 102

Conread position: 19-149
Cow position: chr4:26012498-26012369 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 19-149
Cow position: chr4:26830804-26830675 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 0

Show alignments to all cow chromosomes.