Cow genome map


           Conread name:
           rfbs3925b_o12.y1
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 146
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 119
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 65
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 135
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 140
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               1-385
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 165
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 139
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               2-192
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               2-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               5-420
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               8-438
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 133
               

               Conread position:
               11-434
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               22-200
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               22-244
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               22-327
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               22-431
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               24-318
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               24-359
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               24-438
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 116
               

               Conread position:
               39-206
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               58-310
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               62-322
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               66-428
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               72-433
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 66
               

               Conread position:
               100-430
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               146-424
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               153-415
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               156-336
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               162-441
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               177-438
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 24
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               186-430
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               187-435
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 110
               

               Conread position:
               188-435
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               190-413
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               190-416
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               190-438
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               190-438
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               196-378
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               196-423
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               196-424
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               196-430
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               196-441
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 196
               

               Conread position:
               197-426
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 225
               

               Conread position:
               200-385
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               201-356
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 52
               

               Conread position:
               201-424
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               201-437
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               190, 65
               

               Conread position:
               206-431
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               214-401
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               214-441
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               177, 41
               

               Conread position:
               216-441
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               217-438
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               174, 33
               

               Conread position:
               218-424
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               173, 25
               

               Conread position:
               223-439
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               232-398
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               246-432
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               250-397
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               252-424
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               255-438
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 18
               

               Conread position:
               257-438
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               133, 32
               

               Conread position:
               260-441
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               264-441
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               163, 25
               

               Conread position:
               271-424
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               272-432
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 16
               

               Conread position:
               285-441
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               109, 143
               

               Conread position:
               308-439
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 21
               
Show alignments to all cow chromosomes.