Cow genome map
Conread name: | rfbs3925b_o12.y1 |
Conread position: | 1-163 |
Cow position: | chr1:61241779-61241942 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 92, 57 |
Conread position: | 1-188 |
Cow position: | chr1:1825813-1825992 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 57, 75 |
Conread position: | 1-191 |
Cow position: | chr1:60260646-60260831 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 133 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-191 |
Cow position: | chr1:82865265-82865447 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 57, 9 |
Conread position: | 1-193 |
Cow position: | chr1:84152530-84152724 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 139 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 57, 147 |
Conread position: | 1-205 |
Cow position: | chr1:22516576-22516778 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 57, 146 |
Conread position: | 1-206 |
Cow position: | chr1:86325574-86325375 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 57, 95 |
Conread position: | 1-207 |
Cow position: | chr1:54162773-54162571 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 54, 139 |
Conread position: | 1-207 |
Cow position: | chr1:72181836-72182037 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 54, 70 |
Conread position: | 1-220 |
Cow position: | chr1:42174557-42174340 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 57, 140 |
Conread position: | 1-242 |
Cow position: | chr1:23624194-23624423 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 189 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 57, 69 |
Conread position: | 1-245 |
Cow position: | chr1:81371659-81371426 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 184 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 57, 20 |
Conread position: | 1-314 |
Cow position: | chr1:40223005-40222709 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 223 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 57, 119 |
Conread position: | 1-324 |
Cow position: | chr1:11879136-11878832 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 65 |
Conread position: | 1-330 |
Cow position: | chr1:52206711-52207027 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 135 |
Conread position: | 1-342 |
Cow position: | chr1:27545843-27546166 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 228 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 60, 140 |
Conread position: | 1-370 |
Cow position: | chr1:22495577-22495941 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 24 |
Conread position: | 1-385 |
Cow position: | chr1:76780424-76780034 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 147 |
Conread position: | 1-419 |
Cow position: | chr1:30041768-30042156 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 81 |
Conread position: | 1-438 |
Cow position: | chr1:34892590-34893010 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 165 |
Conread position: | 1-438 |
Cow position: | chr1:64479943-64479519 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 70 |
Conread position: | 1-438 |
Cow position: | chr1:71555756-71555358 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 81 |
Conread position: | 1-441 |
Cow position: | chr1:64099246-64098835 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 139 |
Conread position: | 1-441 |
Cow position: | chr1:74713490-74713908 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 24 |
Conread position: | 1-441 |
Cow position: | chr1:85409837-85409421 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 45 |
Conread position: | 1-441 |
Cow position: | chr1:87914930-87914510 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 90 |
Conread position: | 1-441 |
Cow position: | chr1:92551113-92550669 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 17 |
Conread position: | 2-192 |
Cow position: | chr1:40161248-40161434 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 9, 139 |
Conread position: | 2-441 |
Cow position: | chr1:40164274-40164686 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 139 |
Conread position: | 4-198 |
Cow position: | chr1:57646703-57646890 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 54, 136 |
Conread position: | 4-277 |
Cow position: | chr1:19439988-19439727 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 49 |
Conread position: | 5-420 |
Cow position: | chr1:18223833-18223444 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 8-438 |
Cow position: | chr1:39244540-39244107 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 133 |
Conread position: | 11-434 |
Cow position: | chr1:82573203-82572804 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 69 |
Conread position: | 22-200 |
Cow position: | chr1:28680077-28680248 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 136 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 18, 118 |
Conread position: | 22-244 |
Cow position: | chr1:22070310-22070522 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 172 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 36, 119 |
Conread position: | 22-327 |
Cow position: | chr1:63133678-63133972 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 62 |
Conread position: | 22-431 |
Cow position: | chr1:49727924-49728318 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 31 |
Conread position: | 24-318 |
Cow position: | chr1:69061292-69061563 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 69 |
Conread position: | 24-359 |
Cow position: | chr1:11831335-11831645 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 245 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 34, 15 |
Conread position: | 24-438 |
Cow position: | chr1:102556644-102557025 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 284 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 69, 116 |
Conread position: | 39-206 |
Cow position: | chr1:33084928-33084768 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 19, 99 |
Conread position: | 58-310 |
Cow position: | chr1:45977993-45978235 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 177 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 40, 84 |
Conread position: | 62-322 |
Cow position: | chr1:77755867-77755625 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 194 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 35, 77 |
Conread position: | 66-428 |
Cow position: | chr1:24222424-24222788 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 251 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 131, 21 |
Conread position: | 72-433 |
Cow position: | chr1:31233249-31232901 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 66 |
Conread position: | 100-430 |
Cow position: | chr1:85351-85668 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 99, 38 |
Conread position: | 146-424 |
Cow position: | chr1:58882155-58881879 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 190 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 49, 108 |
Conread position: | 153-415 |
Cow position: | chr1:34311004-34311253 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 92, 12 |
Conread position: | 156-336 |
Cow position: | chr1:2296532-2296704 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 65, 44 |
Conread position: | 162-441 |
Cow position: | chr1:25885925-25885658 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 200 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 14, 41 |
Conread position: | 177-438 |
Cow position: | chr1:3750095-3750343 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 24 |
Conread position: | 181-438 |
Cow position: | chr1:61241916-61242160 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 186-430 |
Cow position: | chr1:28512452-28512209 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 186 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 34, 67 |
Conread position: | 187-435 |
Cow position: | chr1:6985645-6985395 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 180 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 31, 110 |
Conread position: | 188-435 |
Cow position: | chr1:23887159-23887400 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 27, 78 |
Conread position: | 190-413 |
Cow position: | chr1:92048730-92048959 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 13 |
Conread position: | 190-416 |
Cow position: | chr1:86709124-86708896 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 162 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 58 |
Conread position: | 190-438 |
Cow position: | chr1:56858421-56858667 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 24, 65 |
Conread position: | 190-438 |
Cow position: | chr1:57077200-57077449 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 181 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 15, 46 |
Conread position: | 196-378 |
Cow position: | chr1:69290326-69290504 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 19, 84 |
Conread position: | 196-423 |
Cow position: | chr1:99858133-99858353 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 23, 9 |
Conread position: | 196-424 |
Cow position: | chr1:22774439-22774210 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 163 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 23, 75 |
Conread position: | 196-430 |
Cow position: | chr1:21276843-21276621 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 164 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 23, 54 |
Conread position: | 196-441 |
Cow position: | chr1:41092974-41092726 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 19, 196 |
Conread position: | 197-426 |
Cow position: | chr1:57743114-57742874 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 169 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 22, 225 |
Conread position: | 200-385 |
Cow position: | chr1:14560325-14560144 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 201-356 |
Cow position: | chr1:80329831-80329678 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 14, 52 |
Conread position: | 201-424 |
Cow position: | chr1:58341507-58341729 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 160 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 8, 93 |
Conread position: | 201-437 |
Cow position: | chr1:44376844-44377079 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 190, 65 |
Conread position: | 206-431 |
Cow position: | chr1:79915430-79915657 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 13, 60 |
Conread position: | 214-401 |
Cow position: | chr1:69204058-69203862 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 47, 83 |
Conread position: | 214-441 |
Cow position: | chr1:3020558-3020333 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 177, 41 |
Conread position: | 216-441 |
Cow position: | chr1:2599499-2599279 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 67, 38 |
Conread position: | 217-438 |
Cow position: | chr1:90370718-90370505 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 174, 33 |
Conread position: | 218-424 |
Cow position: | chr1:76223788-76223583 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 143 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 173, 25 |
Conread position: | 223-439 |
Cow position: | chr1:56233112-56233320 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 232-398 |
Cow position: | chr1:75126214-75126056 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 246-432 |
Cow position: | chr1:13245820-13245636 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 76 |
Conread position: | 250-397 |
Cow position: | chr1:47371214-47371361 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 35 |
Conread position: | 252-424 |
Cow position: | chr1:61790815-61790632 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 37 |
Conread position: | 255-438 |
Cow position: | chr1:88017567-88017389 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 137, 18 |
Conread position: | 257-438 |
Cow position: | chr1:101883877-101884058 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 133, 32 |
Conread position: | 260-441 |
Cow position: | chr1:65155511-65155330 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 147 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 131, 29 |
Conread position: | 264-441 |
Cow position: | chr1:81292751-81292927 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 126 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 163, 25 |
Conread position: | 271-424 |
Cow position: | chr1:84778135-84778287 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 272-432 |
Cow position: | chr1:9511996-9511843 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 119, 16 |
Conread position: | 285-441 |
Cow position: | chr1:19439506-19439350 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 109, 143 |
Conread position: | 308-439 |
Cow position: | chr1:11831634-11831761 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 89, 21 |
Show alignments to all cow chromosomes.