Cow genome map


           Conread name:
           rfbs3925b_o12.y1
        

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 68
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 121
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 20
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 135
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               8-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               10-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               22-207
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 118
               

               Conread position:
               32-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               38-320
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               39-438
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               40-225
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               56-438
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               61-431
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               61-438
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               72-438
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               75-438
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               80-433
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               84-418
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               84-435
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               146-431
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               149-314
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               150-419
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               152-425
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               154-441
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               159-438
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               162-393
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               162-403
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               177-424
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               180-441
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               185-438
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 106
               

               Conread position:
               191-405
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               191-437
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               193-434
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               201-424
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               191, 13
               

               Conread position:
               204-363
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               216-424
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               205, 73
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               241-438
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               254-438
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               255-433
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               261-435
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               265-441
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               269-390
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               269-424
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               269-441
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               151, 15
               

               Conread position:
               285-438
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               285-439
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               289-424
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               294-438
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               309-438
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               311-440
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               336-438
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.