Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-314 |
| Cow position: | chr12:29760653-29760355 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 1-378 |
| Cow position: | chr12:23892516-23892871 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 1-386 |
| Cow position: | chr12:33277898-33278280 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 24 |
| Conread position: | 1-424 |
| Cow position: | chr12:1993594-1993183 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-431 |
| Cow position: | chr12:10161976-10161550 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 1-441 |
| Cow position: | chr12:26311099-26310687 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 2-441 |
| Cow position: | chr12:16961592-16962003 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 3-193 |
| Cow position: | chr12:22473957-22474140 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 3-312 |
| Cow position: | chr12:21064791-21064494 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 4-218 |
| Cow position: | chr12:37510655-37510445 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 5-415 |
| Cow position: | chr12:21066188-21066585 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 9-323 |
| Cow position: | chr12:23498128-23498430 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 52 |
| Conread position: | 11-320 |
| Cow position: | chr12:25513878-25514169 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 24-441 |
| Cow position: | chr12:2838237-2837850 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 31-438 |
| Cow position: | chr12:27423272-27423661 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 96-441 |
| Cow position: | chr12:36975350-36975010 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 99-413 |
| Cow position: | chr12:8468100-8467811 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 292, 39 |
| Conread position: | 113-438 |
| Cow position: | chr12:7025354-7025039 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 151-410 |
| Cow position: | chr12:10471478-10471737 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 98 |
| Conread position: | 151-438 |
| Cow position: | chr12:18442802-18443076 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 210, 15 |
| Conread position: | 152-415 |
| Cow position: | chr12:20795707-20795973 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 197-415 |
| Cow position: | chr12:33875686-33875473 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 206-369 |
| Cow position: | chr12:38632184-38632342 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 206-437 |
| Cow position: | chr12:7936905-7936663 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 209-438 |
| Cow position: | chr12:8767450-8767218 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 217-441 |
| Cow position: | chr12:28214288-28214506 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 214, 35 |
| Conread position: | 255-441 |
| Cow position: | chr12:20227157-20226971 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 256-438 |
| Cow position: | chr12:11306414-11306231 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 147, 33 |
| Conread position: | 284-438 |
| Cow position: | chr12:7086359-7086515 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 107, 74 |
| Conread position: | 286-433 |
| Cow position: | chr12:38223295-38223145 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 287-438 |
| Cow position: | chr12:33277363-33277213 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 311-438 |
| Cow position: | chr12:5896798-5896670 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 94 |
Show alignments to all cow chromosomes.