Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-191 |
| Cow position: | chr14:10156714-10156528 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 95, 138 |
| Conread position: | 1-196 |
| Cow position: | chr14:12643742-12643929 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-267 |
| Cow position: | chr14:21864014-21864265 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 1-370 |
| Cow position: | chr14:38000539-38000199 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-404 |
| Cow position: | chr14:45018481-45018862 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 1-435 |
| Cow position: | chr14:2298898-2299312 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 1-435 |
| Cow position: | chr14:28007627-28007214 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 52 |
| Conread position: | 1-435 |
| Cow position: | chr14:35605296-35605718 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-435 |
| Cow position: | chr14:41713035-41712622 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 1-438 |
| Cow position: | chr14:15011447-15011880 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 1-441 |
| Cow position: | chr14:14835121-14835543 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-441 |
| Cow position: | chr14:27578774-27579189 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 126 |
| Conread position: | 1-441 |
| Cow position: | chr14:37983387-37983806 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 1-441 |
| Cow position: | chr14:44886569-44886143 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 1-441 |
| Cow position: | chr14:47880112-47880521 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 2-109 |
| Cow position: | chr14:46782379-46782486 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 4-403 |
| Cow position: | chr14:31810652-31810280 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 5-441 |
| Cow position: | chr14:40244184-40243766 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 16-372 |
| Cow position: | chr14:3588438-3588787 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 35-224 |
| Cow position: | chr14:25993976-25994157 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 40-389 |
| Cow position: | chr14:44454434-44454091 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 44-438 |
| Cow position: | chr14:46546011-46546383 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 49-441 |
| Cow position: | chr14:45185317-45184948 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 55-393 |
| Cow position: | chr14:30020893-30021210 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 22 |
| Conread position: | 57-438 |
| Cow position: | chr14:24783195-24783560 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 39 |
| Conread position: | 61-435 |
| Cow position: | chr14:42693604-42693246 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 92-342 |
| Cow position: | chr14:35682934-35683167 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 93-429 |
| Cow position: | chr14:24193261-24192933 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 95-441 |
| Cow position: | chr14:19339757-19340101 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 150-435 |
| Cow position: | chr14:24739130-24738848 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 151-438 |
| Cow position: | chr14:42258834-42258557 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 152-418 |
| Cow position: | chr14:20642791-20643048 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 178-441 |
| Cow position: | chr14:46980161-46980416 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 188-422 |
| Cow position: | chr14:21380369-21380132 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 190-432 |
| Cow position: | chr14:26410642-26410398 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 193-441 |
| Cow position: | chr14:45151904-45152143 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 202, 27 |
| Conread position: | 196-441 |
| Cow position: | chr14:27247303-27247064 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 201-415 |
| Cow position: | chr14:31372651-31372437 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 201-415 |
| Cow position: | chr14:32509704-32509489 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 47 |
| Conread position: | 201-422 |
| Cow position: | chr14:16715689-16715467 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 201-438 |
| Cow position: | chr14:34912130-34912350 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 201-441 |
| Cow position: | chr14:19734929-19735168 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 257-438 |
| Cow position: | chr14:50484591-50484408 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 263-439 |
| Cow position: | chr14:17556409-17556233 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 127, 31 |
| Conread position: | 271-430 |
| Cow position: | chr14:44483194-44483352 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 272-439 |
| Cow position: | chr14:44249933-44249764 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 285-438 |
| Cow position: | chr14:21864261-21864413 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 285-441 |
| Cow position: | chr14:25393848-25393689 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 318-434 |
| Cow position: | chr14:25994305-25994422 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 33 |
Show alignments to all cow chromosomes.