Cow genome map


           Conread name:
           rfbs3925b_o12.y1
        

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 138
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 139
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               1-404
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 138
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 52
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 146
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 126
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 139
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 148
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               2-109
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               4-403
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               16-372
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               35-224
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               40-389
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               44-438
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               49-441
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               55-393
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 22
               

               Conread position:
               57-438
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 39
               

               Conread position:
               61-435
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               92-342
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               158, 23
               

               Conread position:
               93-429
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 42
               

               Conread position:
               95-441
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 36
               

               Conread position:
               150-435
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               151-438
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               152-418
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               178-441
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               188-422
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               190-432
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               193-441
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               202, 27
               

               Conread position:
               196-441
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               201-415
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               201-415
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 47
               

               Conread position:
               201-422
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               201-438
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               201-441
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               257-438
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               263-439
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               127, 31
               

               Conread position:
               271-430
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               272-439
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               285-438
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 12
               

               Conread position:
               285-441
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               318-434
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 33
               
Show alignments to all cow chromosomes.