Cow genome map
Conread name: | rfbs3925b_o12.y1 |
Conread position: | 1-140 |
Cow position: | chr15:21802104-21802246 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1-164 |
Cow position: | chr15:5912731-5912568 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 57, 29 |
Conread position: | 1-191 |
Cow position: | chr15:39288378-39288190 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 139 |
Conread position: | 1-198 |
Cow position: | chr15:14811500-14811317 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-284 |
Cow position: | chr15:40065627-40065907 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 140 |
Conread position: | 1-326 |
Cow position: | chr15:31918277-31917981 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 235 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 57, 92 |
Conread position: | 1-393 |
Cow position: | chr15:9072376-9072766 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 147 |
Conread position: | 1-414 |
Cow position: | chr15:10581093-10581498 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 126 |
Conread position: | 1-418 |
Cow position: | chr15:37491999-37491609 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 54 |
Conread position: | 1-438 |
Cow position: | chr15:44797593-44797152 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 140 |
Conread position: | 1-438 |
Cow position: | chr15:52868524-52868931 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 302 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 98, 47 |
Conread position: | 1-441 |
Cow position: | chr15:23265477-23265892 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 14 |
Conread position: | 1-441 |
Cow position: | chr15:25683381-25683813 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 140 |
Conread position: | 2-127 |
Cow position: | chr15:11289132-11289010 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 106 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 5, 17 |
Conread position: | 2-437 |
Cow position: | chr15:37470269-37469851 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 2-439 |
Cow position: | chr15:53712531-53712951 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 39 |
Conread position: | 11-441 |
Cow position: | chr15:6523729-6523331 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 300 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 82, 69 |
Conread position: | 17-229 |
Cow position: | chr15:4623530-4623323 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 157 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 68 |
Conread position: | 22-441 |
Cow position: | chr15:17641917-17642314 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 116 |
Conread position: | 28-215 |
Cow position: | chr15:14974465-14974283 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 142 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 30, 112 |
Conread position: | 30-418 |
Cow position: | chr15:11997456-11997842 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 110 |
Conread position: | 31-435 |
Cow position: | chr15:27972053-27971664 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 50 |
Conread position: | 39-198 |
Cow position: | chr15:35041812-35041968 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 8, 103 |
Conread position: | 54-429 |
Cow position: | chr15:53728530-53728172 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 63 |
Conread position: | 96-339 |
Cow position: | chr15:50243104-50243327 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 175 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 88, 41 |
Conread position: | 157-432 |
Cow position: | chr15:578889-579166 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 160-441 |
Cow position: | chr15:12048898-12048620 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 164-431 |
Cow position: | chr15:1887919-1888180 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 44, 23 |
Conread position: | 181-441 |
Cow position: | chr15:16669570-16669308 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 22, 82 |
Conread position: | 189-441 |
Cow position: | chr15:35042253-35042498 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 202, 16 |
Conread position: | 190-438 |
Cow position: | chr15:14811061-14810813 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 26, 11 |
Conread position: | 191-411 |
Cow position: | chr15:2436987-2437198 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 170, 8 |
Conread position: | 191-427 |
Cow position: | chr15:35739767-35740003 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 28, 56 |
Conread position: | 192-414 |
Cow position: | chr15:41344190-41343975 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 64 |
Conread position: | 192-414 |
Cow position: | chr15:45665507-45665731 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 23, 40 |
Conread position: | 201-323 |
Cow position: | chr15:11287589-11287473 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 52, 13 |
Conread position: | 201-393 |
Cow position: | chr15:14974233-14974039 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 55, 68 |
Conread position: | 201-426 |
Cow position: | chr15:42116598-42116374 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 73, 13 |
Conread position: | 201-438 |
Cow position: | chr15:49271832-49272049 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 195, 8 |
Conread position: | 204-441 |
Cow position: | chr15:31855352-31855579 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 12, 52 |
Conread position: | 212-433 |
Cow position: | chr15:30570030-30570245 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 36, 12 |
Conread position: | 214-431 |
Cow position: | chr15:26365315-26365523 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 209, 33 |
Conread position: | 214-438 |
Cow position: | chr15:38902562-38902352 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 206, 75 |
Conread position: | 214-441 |
Cow position: | chr15:19813600-19813385 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 203, 36 |
Conread position: | 215-418 |
Cow position: | chr15:1233766-1233560 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 155, 70 |
Conread position: | 215-418 |
Cow position: | chr15:1241116-1240910 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 155, 70 |
Conread position: | 245-441 |
Cow position: | chr15:34551850-34552047 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 65, 45 |
Conread position: | 253-424 |
Cow position: | chr15:51637580-51637409 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 142, 36 |
Conread position: | 255-433 |
Cow position: | chr15:26866786-26866952 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 259-441 |
Cow position: | chr15:36864623-36864437 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 142 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 267-424 |
Cow position: | chr15:3593499-3593341 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 124, 22 |
Conread position: | 272-433 |
Cow position: | chr15:12283120-12283280 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 123, 17 |
Conread position: | 275-438 |
Cow position: | chr15:52131791-52131951 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 132 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 120, 14 |
Conread position: | 280-438 |
Cow position: | chr15:16972184-16972032 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 285-436 |
Cow position: | chr15:9437460-9437615 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 287-441 |
Cow position: | chr15:8630301-8630455 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 103, 149 |
Conread position: | 308-438 |
Cow position: | chr15:36582575-36582441 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 313-438 |
Cow position: | chr15:9428039-9427910 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 23, 44 |
Conread position: | 319-438 |
Cow position: | chr15:39809499-39809617 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 98 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 329-438 |
Cow position: | chr15:5912385-5912274 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 345-438 |
Cow position: | chr15:39360161-39360066 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 82 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.