Cow genome map
Conread name: | rfbs3925b_o12.y1 |
Conread position: | 1-136 |
Cow position: | chr16:16558994-16558856 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-140 |
Cow position: | chr16:45551862-45552001 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 92, 52 |
Conread position: | 1-194 |
Cow position: | chr16:45157452-45157269 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-241 |
Cow position: | chr16:20857385-20857621 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 171 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 54, 146 |
Conread position: | 1-267 |
Cow position: | chr16:52814150-52813911 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 57, 122 |
Conread position: | 1-287 |
Cow position: | chr16:341291-341552 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 205 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 57, 68 |
Conread position: | 1-287 |
Cow position: | chr16:15734597-15734868 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 207 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 57, 140 |
Conread position: | 1-302 |
Cow position: | chr16:56374232-56373937 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 203 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 24 |
Conread position: | 1-310 |
Cow position: | chr16:4856461-4856167 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 29 |
Conread position: | 1-324 |
Cow position: | chr16:19152721-19153041 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 103 |
Conread position: | 1-378 |
Cow position: | chr16:29205015-29204670 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 264 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 60, 82 |
Conread position: | 1-405 |
Cow position: | chr16:17867457-17867076 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 95 |
Conread position: | 1-412 |
Cow position: | chr16:4295500-4295100 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 64 |
Conread position: | 1-415 |
Cow position: | chr16:12243533-12243123 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 14 |
Conread position: | 1-432 |
Cow position: | chr16:22786018-22785602 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 142 |
Conread position: | 1-438 |
Cow position: | chr16:30572588-30572183 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 79 |
Conread position: | 1-438 |
Cow position: | chr16:43850804-43850387 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 142 |
Conread position: | 1-438 |
Cow position: | chr16:47781323-47781743 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 56 |
Conread position: | 1-441 |
Cow position: | chr16:14799714-14799291 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 44 |
Conread position: | 1-441 |
Cow position: | chr16:23035270-23034854 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 38 |
Conread position: | 1-441 |
Cow position: | chr16:41680743-41680316 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 136 |
Conread position: | 3-318 |
Cow position: | chr16:36911016-36910710 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 23 |
Conread position: | 4-208 |
Cow position: | chr16:2312634-2312437 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 54, 79 |
Conread position: | 7-438 |
Cow position: | chr16:13043852-13044295 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 134 |
Conread position: | 10-441 |
Cow position: | chr16:16118490-16118903 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 131 |
Conread position: | 24-381 |
Cow position: | chr16:31375127-31374787 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 26-439 |
Cow position: | chr16:15508979-15509374 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 117 |
Conread position: | 30-379 |
Cow position: | chr16:14443964-14444294 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 112 |
Conread position: | 46-233 |
Cow position: | chr16:2375944-2375761 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 12, 94 |
Conread position: | 46-403 |
Cow position: | chr16:53516560-53516221 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 50 |
Conread position: | 92-318 |
Cow position: | chr16:5131637-5131427 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 172 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 122, 45 |
Conread position: | 94-316 |
Cow position: | chr16:2732020-2731820 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 121, 32 |
Conread position: | 94-438 |
Cow position: | chr16:47391163-47391476 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 251 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 111-356 |
Cow position: | chr16:32351959-32352201 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 109, 39 |
Conread position: | 151-343 |
Cow position: | chr16:6031471-6031291 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 141 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 186, 49 |
Conread position: | 153-438 |
Cow position: | chr16:42406025-42406308 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 48 |
Conread position: | 176-441 |
Cow position: | chr16:48894628-48894375 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 200 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 214, 25 |
Conread position: | 186-425 |
Cow position: | chr16:11597696-11597456 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 33, 107 |
Conread position: | 190-424 |
Cow position: | chr16:16608012-16608242 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 165 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 192-425 |
Cow position: | chr16:55910173-55909940 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 162 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 196-418 |
Cow position: | chr16:45057611-45057830 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 19, 5 |
Conread position: | 201-430 |
Cow position: | chr16:17003648-17003872 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 161 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 81 |
Conread position: | 201-441 |
Cow position: | chr16:3742933-3742688 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 14, 87 |
Conread position: | 204-432 |
Cow position: | chr16:45698703-45698477 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 15, 52 |
Conread position: | 204-437 |
Cow position: | chr16:40271962-40272186 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 158 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 216-438 |
Cow position: | chr16:9703387-9703167 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 173, 39 |
Conread position: | 218-398 |
Cow position: | chr16:32585968-32585788 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 83, 37 |
Conread position: | 241-441 |
Cow position: | chr16:2371548-2371356 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 249-419 |
Cow position: | chr16:23878599-23878770 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 146, 25 |
Conread position: | 256-434 |
Cow position: | chr16:52650256-52650077 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 135, 33 |
Conread position: | 284-430 |
Cow position: | chr16:56373588-56373442 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 285-438 |
Cow position: | chr16:43850216-43850073 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 294-435 |
Cow position: | chr16:48604489-48604351 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 129, 59 |
Conread position: | 294-438 |
Cow position: | chr16:13416992-13416845 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 311-433 |
Cow position: | chr16:608569-608445 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 329-438 |
Cow position: | chr16:4854631-4854524 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.