Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-121 |
| Cow position: | chr17:15450423-15450546 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-140 |
| Cow position: | chr17:933505-933648 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 1-324 |
| Cow position: | chr17:13236632-13236326 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 1-376 |
| Cow position: | chr17:24608885-24609253 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 1-413 |
| Cow position: | chr17:20208761-20208350 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 1-438 |
| Cow position: | chr17:1310190-1309778 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 1-438 |
| Cow position: | chr17:25117034-25117455 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 1-438 |
| Cow position: | chr17:28847595-28847164 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 1-438 |
| Cow position: | chr17:30358441-30358047 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 390, 47 |
| Conread position: | 2-198 |
| Cow position: | chr17:8035785-8035977 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 3-438 |
| Cow position: | chr17:701472-701878 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 7-256 |
| Cow position: | chr17:30329746-30329981 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 94-423 |
| Cow position: | chr17:32451511-32451193 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 96-441 |
| Cow position: | chr17:12842395-12842752 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 111-441 |
| Cow position: | chr17:2735879-2736202 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 166-438 |
| Cow position: | chr17:19789637-19789395 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 179-424 |
| Cow position: | chr17:14009420-14009172 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 190-424 |
| Cow position: | chr17:40391729-40391496 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 192-441 |
| Cow position: | chr17:18418001-18417754 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 196-435 |
| Cow position: | chr17:6980505-6980270 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 201-393 |
| Cow position: | chr17:67766-67579 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 204-441 |
| Cow position: | chr17:27622658-27622419 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 214-429 |
| Cow position: | chr17:10831230-10831017 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 181, 41 |
| Conread position: | 214-435 |
| Cow position: | chr17:7210887-7211097 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 201, 40 |
| Conread position: | 227-419 |
| Cow position: | chr17:35119631-35119443 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 241-438 |
| Cow position: | chr17:3849018-3849216 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 52 |
| Conread position: | 255-423 |
| Cow position: | chr17:24337157-24337326 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 312-441 |
| Cow position: | chr17:13703651-13703780 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-438 |
| Cow position: | chr17:36149779-36149899 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 67 |
| Conread position: | 326-438 |
| Cow position: | chr17:15450868-15450981 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 332-441 |
| Cow position: | chr17:33271404-33271296 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 86 |
Show alignments to all cow chromosomes.