Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-199 |
| Cow position: | chr18:21291013-21290819 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 1-203 |
| Cow position: | chr18:23669275-23669073 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 1-324 |
| Cow position: | chr18:8170180-8170485 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 1-324 |
| Cow position: | chr18:48549981-48550286 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 93 |
| Conread position: | 1-424 |
| Cow position: | chr18:25847012-25846636 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 102, 54 |
| Conread position: | 1-438 |
| Cow position: | chr18:28085566-28085988 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 1-440 |
| Cow position: | chr18:29224687-29225095 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 1-441 |
| Cow position: | chr18:32860651-32861064 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 57 |
| Conread position: | 3-134 |
| Cow position: | chr18:16258855-16258986 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 3-198 |
| Cow position: | chr18:31393587-31393773 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 3-438 |
| Cow position: | chr18:22065351-22064951 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 4-380 |
| Cow position: | chr18:14480432-14480787 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 9-287 |
| Cow position: | chr18:8204529-8204793 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 24-140 |
| Cow position: | chr18:39475243-39475124 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 38-355 |
| Cow position: | chr18:27404933-27405237 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 61-433 |
| Cow position: | chr18:35471749-35471393 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 74-430 |
| Cow position: | chr18:22433718-22433381 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 12 |
| Conread position: | 91-350 |
| Cow position: | chr18:23504516-23504268 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 92-438 |
| Cow position: | chr18:1700679-1700992 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 96-424 |
| Cow position: | chr18:53028793-53029108 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 106-438 |
| Cow position: | chr18:23316671-23316363 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 151-441 |
| Cow position: | chr18:16259399-16259678 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 153-407 |
| Cow position: | chr18:21290647-21290390 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 177-424 |
| Cow position: | chr18:10103446-10103687 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 177-438 |
| Cow position: | chr18:50880635-50880894 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 185-419 |
| Cow position: | chr18:37493220-37493450 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 191-424 |
| Cow position: | chr18:21767146-21766911 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 191-431 |
| Cow position: | chr18:29030162-29029921 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 191-433 |
| Cow position: | chr18:54166238-54165991 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 192-438 |
| Cow position: | chr18:33896007-33896254 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 193-424 |
| Cow position: | chr18:17228089-17227857 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 196-424 |
| Cow position: | chr18:33610067-33610306 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 201-403 |
| Cow position: | chr18:39475096-39474897 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 190, 53 |
| Conread position: | 205-400 |
| Cow position: | chr18:26667334-26667514 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 209-423 |
| Cow position: | chr18:16539102-16539312 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 181, 16 |
| Conread position: | 218-423 |
| Cow position: | chr18:16147961-16147756 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 251-438 |
| Cow position: | chr18:53047830-53047639 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 140, 38 |
| Conread position: | 295-438 |
| Cow position: | chr18:21123250-21123110 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 308-438 |
| Cow position: | chr18:31394002-31394137 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 315-441 |
| Cow position: | chr18:50242347-50242472 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 88 |
Show alignments to all cow chromosomes.