Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-138 |
| Cow position: | chr19:426254-426114 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-140 |
| Cow position: | chr19:30452754-30452611 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-140 |
| Cow position: | chr19:38396046-38395905 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-208 |
| Cow position: | chr19:38545995-38546192 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 1-224 |
| Cow position: | chr19:28800122-28799903 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 1-312 |
| Cow position: | chr19:20700096-20700400 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 1-323 |
| Cow position: | chr19:4609876-4610168 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-374 |
| Cow position: | chr19:33285288-33284924 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 1-438 |
| Cow position: | chr19:30051979-30051576 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 1-441 |
| Cow position: | chr19:30746422-30746854 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 3-438 |
| Cow position: | chr19:3082101-3082511 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 4-204 |
| Cow position: | chr19:19242116-19242303 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 4-386 |
| Cow position: | chr19:14534627-14534290 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 95-438 |
| Cow position: | chr19:17439974-17439654 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 228, 43 |
| Conread position: | 95-441 |
| Cow position: | chr19:30350111-30349788 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 99-441 |
| Cow position: | chr19:25846443-25846749 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 152-336 |
| Cow position: | chr19:35873816-35873630 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 153-344 |
| Cow position: | chr19:30452372-30452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 164-437 |
| Cow position: | chr19:28560657-28560383 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 177-415 |
| Cow position: | chr19:10112674-10112905 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 191-438 |
| Cow position: | chr19:4600700-4600943 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 196-397 |
| Cow position: | chr19:43806291-43806094 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 196-438 |
| Cow position: | chr19:30188592-30188350 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 17 |
| Conread position: | 196-441 |
| Cow position: | chr19:51070684-51070446 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 201-424 |
| Cow position: | chr19:22423108-22422882 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 204-433 |
| Cow position: | chr19:49483955-49484183 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 210-423 |
| Cow position: | chr19:23908252-23908041 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 249-438 |
| Cow position: | chr19:6362532-6362719 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 254-438 |
| Cow position: | chr19:19242325-19242511 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 254-438 |
| Cow position: | chr19:22670609-22670425 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 137, 35 |
| Conread position: | 269-439 |
| Cow position: | chr19:30880082-30880250 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 280-441 |
| Cow position: | chr19:28606078-28605914 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 285-439 |
| Cow position: | chr19:33954976-33955131 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 285-441 |
| Cow position: | chr19:4548373-4548217 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 296-435 |
| Cow position: | chr19:36388635-36388505 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 304-441 |
| Cow position: | chr19:47772322-47772464 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 307-438 |
| Cow position: | chr19:3630953-3631084 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 308-441 |
| Cow position: | chr19:41504271-41504406 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 314-441 |
| Cow position: | chr19:13448471-13448599 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 114 |
Show alignments to all cow chromosomes.