Cow genome map

Conread name: rfbs3925b_o12.y1

Conread position: 1-125
Cow position: chr20:19238358-19238237 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 36

Conread position: 1-206
Cow position: chr20:32153579-32153779 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 87

Conread position: 1-262
Cow position: chr20:20350922-20350675 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 142

Conread position: 1-349
Cow position: chr20:16585562-16585228 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 1-378
Cow position: chr20:17474716-17474344 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 142

Conread position: 1-429
Cow position: chr20:35249522-35249105 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 1-430
Cow position: chr20:25293664-25294091 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 150

Conread position: 1-432
Cow position: chr20:31563905-31563496 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 142

Conread position: 1-438
Cow position: chr20:22920099-22919662 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 1-438
Cow position: chr20:27977635-27977212 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 35

Conread position: 1-441
Cow position: chr20:24280038-24280461 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 114

Conread position: 2-134
Cow position: chr20:27843717-27843852 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 2-184
Cow position: chr20:17831896-17832071 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 53

Conread position: 3-211
Cow position: chr20:7539152-7538946 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 135

Conread position: 4-155
Cow position: chr20:26083910-26083752 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 4-438
Cow position: chr20:4851227-4851660 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 137

Conread position: 4-441
Cow position: chr20:13589086-13588660 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 34

Conread position: 6-196
Cow position: chr20:21402978-21403162 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 55

Conread position: 8-288
Cow position: chr20:23422320-23422057 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 20

Conread position: 22-441
Cow position: chr20:14864781-14864374 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 27-438
Cow position: chr20:15147891-15147507 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 35-218
Cow position: chr20:25126396-25126222 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 62

Conread position: 84-438
Cow position: chr20:36707305-36706972 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 251, 11

Conread position: 93-355
Cow position: chr20:12119453-12119201 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 47

Conread position: 95-409
Cow position: chr20:25991924-25991612 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 43

Conread position: 127-438
Cow position: chr20:22420612-22420309 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 11

Conread position: 153-391
Cow position: chr20:26992986-26993216 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 41

Conread position: 153-438
Cow position: chr20:27844228-27844510 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 47

Conread position: 157-423
Cow position: chr20:13023299-13023044 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 145, 44

Conread position: 163-438
Cow position: chr20:5668572-5668288 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 106

Conread position: 177-424
Cow position: chr20:22695090-22694849 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 100

Conread position: 186-441
Cow position: chr20:13790232-13790491 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 72

Conread position: 189-428
Cow position: chr20:14990590-14990350 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 78

Conread position: 214-435
Cow position: chr20:9918734-9918964 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 51

Conread position: 231-407
Cow position: chr20:36615960-36616130 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 235-438
Cow position: chr20:21002253-21002049 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 13

Conread position: 240-441
Cow position: chr20:33154681-33154489 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 11

Conread position: 245-438
Cow position: chr20:3377004-3376818 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 176, 10

Conread position: 260-438
Cow position: chr20:21847588-21847416 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 128, 29

Conread position: 281-433
Cow position: chr20:21415329-21415176 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 13

Conread position: 302-438
Cow position: chr20:23422006-23421865 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 302-441
Cow position: chr20:28617750-28617609 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 304-438
Cow position: chr20:30285722-30285857 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 81

Show alignments to all cow chromosomes.