Cow genome map

Conread name: rfbs3925b_o12.y1

Conread position: 1-136
Cow position: chr21:37941596-37941458 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 81

Conread position: 1-169
Cow position: chr21:12077439-12077610 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 65

Conread position: 1-198
Cow position: chr21:33292804-33292998 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 137

Conread position: 1-296
Cow position: chr21:41041502-41041772 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 72

Conread position: 1-312
Cow position: chr21:33974582-33974887 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 57, 120

Conread position: 1-342
Cow position: chr21:6280384-6280707 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 92, 26

Conread position: 1-350
Cow position: chr21:16166551-16166212 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 58, 68

Conread position: 1-355
Cow position: chr21:39765925-39766262 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 17

Conread position: 1-396
Cow position: chr21:8273475-8273072 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 151

Conread position: 1-411
Cow position: chr21:5597241-5597625 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 293
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 33

Conread position: 1-429
Cow position: chr21:24972516-24972109 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 1-432
Cow position: chr21:25018954-25019369 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 138

Conread position: 1-434
Cow position: chr21:23399043-23399472 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 145

Conread position: 1-438
Cow position: chr21:26632354-26631956 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 9

Conread position: 1-438
Cow position: chr21:37355766-37356174 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 1-441
Cow position: chr21:15543862-15543438 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 92

Conread position: 2-259
Cow position: chr21:24944805-24944550 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 135

Conread position: 6-441
Cow position: chr21:45447683-45448099 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 131

Conread position: 7-438
Cow position: chr21:1991381-1991797 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 96-433
Cow position: chr21:12756085-12756436 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 43

Conread position: 104-438
Cow position: chr21:40442420-40442104 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 153, 33

Conread position: 151-438
Cow position: chr21:37941265-37940997 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 50

Conread position: 151-441
Cow position: chr21:39075259-39074969 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 160-441
Cow position: chr21:22941621-22941886 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 59, 36

Conread position: 163-438
Cow position: chr21:45962639-45962906 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 32

Conread position: 176-357
Cow position: chr21:29943162-29943334 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 177-432
Cow position: chr21:36372157-36372411 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 239, 18

Conread position: 178-437
Cow position: chr21:37341904-37341644 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 77

Conread position: 189-373
Cow position: chr21:32813877-32813694 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 66

Conread position: 193-402
Cow position: chr21:27089852-27089645 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 197, 61

Conread position: 201-423
Cow position: chr21:26742227-26742021 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 51

Conread position: 204-440
Cow position: chr21:6667475-6667709 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 64

Conread position: 258-441
Cow position: chr21:23286310-23286132 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 8

Conread position: 284-439
Cow position: chr21:27521064-27520909 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 115

Conread position: 288-441
Cow position: chr21:29644001-29643849 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 111, 0

Conread position: 294-438
Cow position: chr21:16679151-16679291 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 294-441
Cow position: chr21:5994613-5994463 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 25

Conread position: 297-401
Cow position: chr21:47164395-47164498 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.