Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-199 |
| Cow position: | chr22:25404966-25404772 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 1-206 |
| Cow position: | chr22:43044148-43043948 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 1-257 |
| Cow position: | chr22:24335474-24335224 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 1-349 |
| Cow position: | chr22:45291529-45291867 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 1-403 |
| Cow position: | chr22:14508563-14508181 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 1-424 |
| Cow position: | chr22:28755479-28755085 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 1-434 |
| Cow position: | chr22:609912-609502 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 1-441 |
| Cow position: | chr22:25457866-25458291 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 2-287 |
| Cow position: | chr22:19295926-19296208 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 7-414 |
| Cow position: | chr22:15696182-15696589 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 10-440 |
| Cow position: | chr22:7281245-7281661 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 35-435 |
| Cow position: | chr22:32018576-32018189 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 41-332 |
| Cow position: | chr22:12628436-12628163 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 62-441 |
| Cow position: | chr22:47385893-47385511 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 78-435 |
| Cow position: | chr22:4057874-4058225 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 92-438 |
| Cow position: | chr22:44637667-44638016 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 104-374 |
| Cow position: | chr22:29005475-29005212 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 162-424 |
| Cow position: | chr22:6014284-6014019 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 166-433 |
| Cow position: | chr22:29064508-29064771 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 171-432 |
| Cow position: | chr22:39904638-39904391 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 177-424 |
| Cow position: | chr22:8714057-8714298 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 187-437 |
| Cow position: | chr22:3288634-3288880 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 232, 18 |
| Conread position: | 190-437 |
| Cow position: | chr22:13997652-13997901 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 190-441 |
| Cow position: | chr22:246503-246749 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 191-423 |
| Cow position: | chr22:40853345-40853566 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 192-414 |
| Cow position: | chr22:45327334-45327561 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 204-438 |
| Cow position: | chr22:42421553-42421315 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 205-438 |
| Cow position: | chr22:15890120-15890350 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 211, 9 |
| Conread position: | 215-415 |
| Cow position: | chr22:5715079-5714882 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 178, 37 |
| Conread position: | 227-424 |
| Cow position: | chr22:20912332-20912141 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 254-438 |
| Cow position: | chr22:12537335-12537146 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 260-435 |
| Cow position: | chr22:4932149-4932325 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 265-419 |
| Cow position: | chr22:41321569-41321724 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 273-438 |
| Cow position: | chr22:44037453-44037615 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 285-440 |
| Cow position: | chr22:34087245-34087093 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 326-435 |
| Cow position: | chr22:45497034-45497145 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.