Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-207 |
| Cow position: | chr24:26846259-26846052 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 1-319 |
| Cow position: | chr24:19627331-19627636 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 60, 140 |
| Conread position: | 1-327 |
| Cow position: | chr24:43492502-43492201 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-429 |
| Cow position: | chr24:37386344-37385952 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 244, 44 |
| Conread position: | 1-432 |
| Cow position: | chr24:41405312-41404916 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 1-435 |
| Cow position: | chr24:25246038-25246459 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-438 |
| Cow position: | chr24:17763264-17762843 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 1-438 |
| Cow position: | chr24:42817261-42817689 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 1-439 |
| Cow position: | chr24:43351096-43350673 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 1-441 |
| Cow position: | chr24:36853324-36853777 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 3-393 |
| Cow position: | chr24:25343064-25343438 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 4-355 |
| Cow position: | chr24:7038769-7039101 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 4-435 |
| Cow position: | chr24:6177400-6177825 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 5-320 |
| Cow position: | chr24:12234307-12234002 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 141 |
| Conread position: | 6-226 |
| Cow position: | chr24:6665436-6665222 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 19-429 |
| Cow position: | chr24:19961496-19961101 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 22-438 |
| Cow position: | chr24:38643635-38644048 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 34-435 |
| Cow position: | chr24:6424019-6423640 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 39-441 |
| Cow position: | chr24:14913522-14913150 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 47-438 |
| Cow position: | chr24:31301613-31301256 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 96-336 |
| Cow position: | chr24:25934504-25934725 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 101-376 |
| Cow position: | chr24:36551252-36550996 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 104-431 |
| Cow position: | chr24:9867369-9867059 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 106-310 |
| Cow position: | chr24:1296948-1296758 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 149-441 |
| Cow position: | chr24:22839468-22839176 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 162, 5 |
| Conread position: | 150-354 |
| Cow position: | chr24:29515982-29515780 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 151-438 |
| Cow position: | chr24:32579326-32579608 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 50 |
| Conread position: | 151-441 |
| Cow position: | chr24:17417225-17417513 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 153-432 |
| Cow position: | chr24:15474842-15475107 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 42 |
| Conread position: | 161-438 |
| Cow position: | chr24:35835865-35835613 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 177-437 |
| Cow position: | chr24:27229211-27228949 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 218-424 |
| Cow position: | chr24:29070281-29070073 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 232-418 |
| Cow position: | chr24:27510995-27510816 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 239-438 |
| Cow position: | chr24:36097693-36097895 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 256-439 |
| Cow position: | chr24:25966861-25967038 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 257-438 |
| Cow position: | chr24:21714958-21714775 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 265-438 |
| Cow position: | chr24:26286833-26287008 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 24 |
| Conread position: | 275-433 |
| Cow position: | chr24:33274122-33274274 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 286-441 |
| Cow position: | chr24:1295988-1295834 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 292-441 |
| Cow position: | chr24:19627694-19627848 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 308-438 |
| Cow position: | chr24:36098886-36098751 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.