Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-140 |
| Cow position: | chr25:27798230-27798370 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-198 |
| Cow position: | chr25:10013409-10013218 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 1-207 |
| Cow position: | chr25:30614164-30614364 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-249 |
| Cow position: | chr25:14279287-14279524 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 1-303 |
| Cow position: | chr25:18644052-18643753 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 1-441 |
| Cow position: | chr25:5567741-5567305 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 1-441 |
| Cow position: | chr25:18206280-18205865 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 140 |
| Conread position: | 3-383 |
| Cow position: | chr25:38358119-38358484 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 4-197 |
| Cow position: | chr25:23842276-23842463 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 5-216 |
| Cow position: | chr25:17660284-17660490 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 96-441 |
| Cow position: | chr25:36235696-36235375 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 44 |
| Conread position: | 107-441 |
| Cow position: | chr25:33924831-33925152 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 150-418 |
| Cow position: | chr25:16193367-16193108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 55 |
| Conread position: | 151-362 |
| Cow position: | chr25:16429815-16429622 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 151-441 |
| Cow position: | chr25:13123378-13123666 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 49 |
| Conread position: | 152-424 |
| Cow position: | chr25:9625646-9625927 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 153-430 |
| Cow position: | chr25:13704174-13704447 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 156-438 |
| Cow position: | chr25:23014330-23014600 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 167-433 |
| Cow position: | chr25:16940688-16940421 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 193-424 |
| Cow position: | chr25:23671985-23671760 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 201-430 |
| Cow position: | chr25:17472875-17473099 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 201-441 |
| Cow position: | chr25:19686545-19686306 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 224-424 |
| Cow position: | chr25:18262522-18262321 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 167, 65 |
| Conread position: | 249-418 |
| Cow position: | chr25:20180725-20180897 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 280-440 |
| Cow position: | chr25:5377354-5377196 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 140, 9 |
| Conread position: | 280-441 |
| Cow position: | chr25:30036036-30036196 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 9 |
Show alignments to all cow chromosomes.