Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-136 |
| Cow position: | chr27:9184557-9184414 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 136 |
| Conread position: | 1-140 |
| Cow position: | chr27:25676160-25676018 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 1-187 |
| Cow position: | chr27:5530682-5530501 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 108 |
| Conread position: | 1-194 |
| Cow position: | chr27:13695182-13694994 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 1-207 |
| Cow position: | chr27:26033321-26033122 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 80 |
| Conread position: | 1-434 |
| Cow position: | chr27:3934754-3935187 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 1-438 |
| Cow position: | chr27:9261761-9261330 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 1-441 |
| Cow position: | chr27:31238025-31238474 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 10-438 |
| Cow position: | chr27:30888974-30889380 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 297 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 44-439 |
| Cow position: | chr27:26091514-26091900 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 54-410 |
| Cow position: | chr27:11935580-11935242 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 172-438 |
| Cow position: | chr27:17564800-17564542 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 182-418 |
| Cow position: | chr27:11755715-11755943 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 187-418 |
| Cow position: | chr27:4962387-4962613 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 189-430 |
| Cow position: | chr27:17924238-17924479 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 190-390 |
| Cow position: | chr27:6292447-6292248 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 190-436 |
| Cow position: | chr27:4295453-4295703 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 196-424 |
| Cow position: | chr27:20012556-20012787 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 201-409 |
| Cow position: | chr27:23074039-23073832 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 202-395 |
| Cow position: | chr27:13860849-13861041 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 205-423 |
| Cow position: | chr27:29004737-29004944 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 214-420 |
| Cow position: | chr27:2246725-2246518 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 219-377 |
| Cow position: | chr27:18573764-18573608 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 254-438 |
| Cow position: | chr27:18057197-18057012 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 255-438 |
| Cow position: | chr27:6534367-6534548 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 256-441 |
| Cow position: | chr27:18589432-18589251 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 269-441 |
| Cow position: | chr27:11021435-11021271 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 278-424 |
| Cow position: | chr27:5261496-5261350 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 291-441 |
| Cow position: | chr27:280957-281110 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 298-441 |
| Cow position: | chr27:15211414-15211267 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 321-438 |
| Cow position: | chr27:7860135-7860254 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 20 |
Show alignments to all cow chromosomes.