Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-132 |
| Cow position: | chr28:26627114-26626979 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-185 |
| Cow position: | chr28:6486625-6486819 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 180 |
| Conread position: | 1-203 |
| Cow position: | chr28:3068951-3069153 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 1-252 |
| Cow position: | chr28:6277517-6277276 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 1-292 |
| Cow position: | chr28:15915220-15914940 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 1-340 |
| Cow position: | chr28:7607266-7607584 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 1-343 |
| Cow position: | chr28:22829955-22830284 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 1-430 |
| Cow position: | chr28:22855325-22855718 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-436 |
| Cow position: | chr28:28630603-28631026 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 1-439 |
| Cow position: | chr28:2340567-2340995 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 1-441 |
| Cow position: | chr28:34347220-34346799 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-206 |
| Cow position: | chr28:19356341-19356531 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 10-441 |
| Cow position: | chr28:34117128-34117548 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 11-247 |
| Cow position: | chr28:21940225-21940457 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 13-371 |
| Cow position: | chr28:22613955-22614297 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 22-441 |
| Cow position: | chr28:22360686-22361082 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 39-438 |
| Cow position: | chr28:23390404-23390797 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 96-434 |
| Cow position: | chr28:16805353-16805021 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 112-438 |
| Cow position: | chr28:15349604-15349913 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 309, 26 |
| Conread position: | 151-435 |
| Cow position: | chr28:10647915-10647646 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 151-438 |
| Cow position: | chr28:24468207-24468497 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 171 |
| Conread position: | 156-441 |
| Cow position: | chr28:11379631-11379332 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 106 |
| Conread position: | 168-438 |
| Cow position: | chr28:26626978-26626728 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 188-441 |
| Cow position: | chr28:32284788-32284540 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 203, 8 |
| Conread position: | 190-374 |
| Cow position: | chr28:480522-480335 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 191-432 |
| Cow position: | chr28:11783823-11783579 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 201-433 |
| Cow position: | chr28:28438474-28438706 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 201-441 |
| Cow position: | chr28:17598826-17598571 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 206-438 |
| Cow position: | chr28:31994429-31994199 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 218-423 |
| Cow position: | chr28:7595450-7595246 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 178, 55 |
| Conread position: | 218-433 |
| Cow position: | chr28:757353-757145 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 218-441 |
| Cow position: | chr28:22051679-22051897 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 173, 52 |
| Conread position: | 231-437 |
| Cow position: | chr28:20252189-20252392 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 250-431 |
| Cow position: | chr28:3803124-3803309 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 256-438 |
| Cow position: | chr28:17482666-17482493 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 256-441 |
| Cow position: | chr28:6277246-6277067 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 28 |
| Conread position: | 257-441 |
| Cow position: | chr28:5912570-5912390 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 281-424 |
| Cow position: | chr28:23155903-23156046 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 292-424 |
| Cow position: | chr28:24330466-24330332 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 302-433 |
| Cow position: | chr28:6488088-6488217 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 31 |
Show alignments to all cow chromosomes.