Cow genome map
| Conread name: | rfbs3925b_o12.y1 |
| Conread position: | 1-386 |
| Cow position: | chr29:18338517-18338142 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 1-438 |
| Cow position: | chr29:2481316-2480904 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 1-438 |
| Cow position: | chr29:13040508-13040100 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 1-438 |
| Cow position: | chr29:21198625-21198200 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 1-438 |
| Cow position: | chr29:35036759-35037184 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 52 |
| Conread position: | 1-439 |
| Cow position: | chr29:16359644-16360076 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 148 |
| Conread position: | 1-441 |
| Cow position: | chr29:8906554-8906974 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 2-410 |
| Cow position: | chr29:37207788-37208185 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 4-190 |
| Cow position: | chr29:17339279-17339098 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 4-441 |
| Cow position: | chr29:22454799-22454382 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 24-438 |
| Cow position: | chr29:19931377-19931785 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 114 |
| Conread position: | 26-233 |
| Cow position: | chr29:30921641-30921434 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 41-438 |
| Cow position: | chr29:478199-478571 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 45-421 |
| Cow position: | chr29:7738627-7738263 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 96-398 |
| Cow position: | chr29:30813562-30813848 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 151-430 |
| Cow position: | chr29:3346134-3346408 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 151-438 |
| Cow position: | chr29:4458760-4459038 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 240, 59 |
| Conread position: | 156-424 |
| Cow position: | chr29:26940139-26940395 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 235, 12 |
| Conread position: | 185-424 |
| Cow position: | chr29:22332622-22332377 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 190-423 |
| Cow position: | chr29:7828556-7828325 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 190-430 |
| Cow position: | chr29:7749986-7749744 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 190-434 |
| Cow position: | chr29:23988694-23988938 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 190-437 |
| Cow position: | chr29:2848216-2847966 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 202-438 |
| Cow position: | chr29:8891043-8890814 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 214-430 |
| Cow position: | chr29:7959595-7959379 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 181, 51 |
| Conread position: | 218-413 |
| Cow position: | chr29:17712238-17712440 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 136 |
| Conread position: | 219-406 |
| Cow position: | chr29:34331009-34330826 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 172, 35 |
| Conread position: | 219-408 |
| Cow position: | chr29:19188278-19188459 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 239-434 |
| Cow position: | chr29:30921152-30920955 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 257-423 |
| Cow position: | chr29:13608686-13608519 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 285-438 |
| Cow position: | chr29:794888-795041 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-438 |
| Cow position: | chr29:12193508-12193613 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 40 |
Show alignments to all cow chromosomes.