Cow genome map


           Conread name:
           rfbs3925b_o12.y1
        

               Conread position:
               1-115
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               92, 52
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 128
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 138
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 49
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 133
               

               Conread position:
               5-415
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               6-438
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               8-380
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               14-173
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               22-438
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 123
               

               Conread position:
               22-438
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               24-366
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 118
               

               Conread position:
               39-438
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 5
               

               Conread position:
               69-318
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               79-418
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               92-320
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               96-438
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               153-438
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               154-441
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               43, 100
               

               Conread position:
               173-441
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               202, 15
               

               Conread position:
               190-435
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               191-419
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               192-408
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               196, 20
               

               Conread position:
               192-438
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               205-432
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               214, 40
               

               Conread position:
               218-421
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               218-437
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 37
               

               Conread position:
               220-424
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               225-438
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               231-438
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               240-438
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               254-441
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               255-441
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 42
               

               Conread position:
               257-438
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               135, 37
               

               Conread position:
               257-438
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               258-418
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               265-430
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               125, 24
               

               Conread position:
               272-441
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               148, 16
               

               Conread position:
               272-441
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               285-434
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               109, 77
               

               Conread position:
               286-418
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               286-438
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               308-438
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               85, 118
               

               Conread position:
               308-441
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 131
               

               Conread position:
               329-438
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.