Cow genome map

Conread name: rfbs3925b_o12.y1

Conread position: 1-183
Cow position: chr7:12920803-12920609 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-198
Cow position: chr7:48335405-48335212 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 140

Conread position: 1-199
Cow position: chr7:61754658-61754847 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 93

Conread position: 1-203
Cow position: chr7:11187285-11187482 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 57, 139

Conread position: 1-203
Cow position: chr7:52130576-52130772 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 43

Conread position: 1-206
Cow position: chr7:37024895-37025095 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 139

Conread position: 1-207
Cow position: chr7:28671954-28671754 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 95

Conread position: 1-226
Cow position: chr7:35754526-35754751 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 137

Conread position: 1-243
Cow position: chr7:27763048-27763280 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 14

Conread position: 1-336
Cow position: chr7:1398217-1397899 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 139

Conread position: 1-429
Cow position: chr7:63328141-63328573 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 1-435
Cow position: chr7:11593138-11592743 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 57, 9

Conread position: 1-435
Cow position: chr7:27709597-27709164 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 1-436
Cow position: chr7:20289209-20288773 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 75

Conread position: 1-438
Cow position: chr7:42222370-42221937 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 140

Conread position: 1-438
Cow position: chr7:61425617-61426058 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 138

Conread position: 1-441
Cow position: chr7:13822850-13823276 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 1-441
Cow position: chr7:29378079-29377662 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 1-441
Cow position: chr7:62516076-62516497 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 17

Conread position: 2-323
Cow position: chr7:40622011-40622316 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 92

Conread position: 3-438
Cow position: chr7:20104952-20104528 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 68

Conread position: 3-438
Cow position: chr7:65953332-65952911 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 55

Conread position: 4-197
Cow position: chr7:14252635-14252815 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 79

Conread position: 4-441
Cow position: chr7:43004446-43004872 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 144

Conread position: 13-441
Cow position: chr7:39512519-39512116 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 47-303
Cow position: chr7:2967242-2967490 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 11, 92

Conread position: 67-438
Cow position: chr7:67498828-67499182 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 73

Conread position: 77-441
Cow position: chr7:62048536-62048897 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 63

Conread position: 85-316
Cow position: chr7:68367399-68367177 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 161, 62

Conread position: 94-356
Cow position: chr7:64366718-64366957 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 101-435
Cow position: chr7:56664234-56664543 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 104-432
Cow position: chr7:5701088-5701396 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 34

Conread position: 151-386
Cow position: chr7:28560844-28560620 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 196, 61

Conread position: 157-441
Cow position: chr7:45064206-45063927 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 164-441
Cow position: chr7:37317795-37317509 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 50

Conread position: 168-440
Cow position: chr7:59164120-59164387 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 11

Conread position: 173-424
Cow position: chr7:68246534-68246784 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 9

Conread position: 179-430
Cow position: chr7:53405922-53406175 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 48

Conread position: 186-423
Cow position: chr7:48751676-48751444 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 205, 28

Conread position: 187-424
Cow position: chr7:49893437-49893206 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 203, 23

Conread position: 191-441
Cow position: chr7:45721968-45722215 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 96

Conread position: 192-424
Cow position: chr7:45099471-45099701 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 13

Conread position: 193-437
Cow position: chr7:33062524-33062284 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 39

Conread position: 195-440
Cow position: chr7:5247693-5247447 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 61

Conread position: 201-364
Cow position: chr7:11187793-11187956 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 55

Conread position: 202-433
Cow position: chr7:5435634-5435403 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 53

Conread position: 202-434
Cow position: chr7:5448052-5447820 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 53

Conread position: 203-424
Cow position: chr7:52131374-52131595 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 51

Conread position: 203-433
Cow position: chr7:59844711-59844936 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 187, 58

Conread position: 217-437
Cow position: chr7:33339408-33339621 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 174, 38

Conread position: 218-437
Cow position: chr7:23921451-23921665 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 172, 22

Conread position: 218-437
Cow position: chr7:52532855-52532627 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 256-424
Cow position: chr7:43231053-43231222 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 135, 33

Conread position: 257-441
Cow position: chr7:10020549-10020366 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 23

Conread position: 259-424
Cow position: chr7:19465533-19465371 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 30

Conread position: 266-424
Cow position: chr7:26479186-26479031 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 23

Conread position: 269-431
Cow position: chr7:46216365-46216524 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 125, 20

Conread position: 269-433
Cow position: chr7:31442036-31441872 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 20

Conread position: 295-441
Cow position: chr7:59204610-59204760 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.