Cow genome map

Conread name: rfbs3925b_o12.y1

Conread position: 1-113
Cow position: chr8:24517410-24517296 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 18

Conread position: 1-137
Cow position: chr8:19876777-19876638 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-209
Cow position: chr8:44857500-44857704 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 139

Conread position: 1-236
Cow position: chr8:8480906-8480684 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 37

Conread position: 1-258
Cow position: chr8:19772531-19772773 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 69

Conread position: 1-287
Cow position: chr8:21119239-21118958 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 44

Conread position: 1-306
Cow position: chr8:27369121-27369410 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 136

Conread position: 1-324
Cow position: chr8:11792230-11792556 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 148

Conread position: 1-378
Cow position: chr8:21078574-21078927 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 45

Conread position: 1-424
Cow position: chr8:54158766-54159175 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 141

Conread position: 1-431
Cow position: chr8:45686398-45686014 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 57, 81

Conread position: 1-433
Cow position: chr8:23441099-23440661 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 143

Conread position: 1-438
Cow position: chr8:19369453-19369054 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 67

Conread position: 1-438
Cow position: chr8:22103163-22102736 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 82

Conread position: 1-438
Cow position: chr8:30021883-30021470 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 68

Conread position: 1-438
Cow position: chr8:33437826-33438239 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 1-441
Cow position: chr8:2974685-2975126 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 1-441
Cow position: chr8:48682461-48682041 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 2-207
Cow position: chr8:59137866-59137667 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 144

Conread position: 2-229
Cow position: chr8:49384605-49384827 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 81

Conread position: 4-140
Cow position: chr8:41951635-41951775 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 4-149
Cow position: chr8:12790807-12790659 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 77

Conread position: 5-438
Cow position: chr8:4337033-4336605 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 5-438
Cow position: chr8:40432828-40432415 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 81

Conread position: 21-439
Cow position: chr8:7104364-7103960 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 82-441
Cow position: chr8:5874267-5874599 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 91-418
Cow position: chr8:40273516-40273208 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 241, 8

Conread position: 98-441
Cow position: chr8:18725343-18725661 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 42

Conread position: 105-382
Cow position: chr8:20341571-20341317 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 156, 34

Conread position: 149-438
Cow position: chr8:952208-952481 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 51

Conread position: 151-438
Cow position: chr8:53891691-53891985 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 135

Conread position: 170-432
Cow position: chr8:20286772-20287038 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 42

Conread position: 170-438
Cow position: chr8:18801424-18801690 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 9

Conread position: 176-441
Cow position: chr8:54828438-54828695 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 23

Conread position: 177-422
Cow position: chr8:39097927-39097678 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 100

Conread position: 177-432
Cow position: chr8:37381342-37381587 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 10

Conread position: 181-350
Cow position: chr8:9985929-9986095 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 33

Conread position: 182-430
Cow position: chr8:21945625-21945874 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 5

Conread position: 186-438
Cow position: chr8:33819028-33818781 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 19

Conread position: 190-418
Cow position: chr8:36686877-36687106 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 72

Conread position: 190-424
Cow position: chr8:41411436-41411671 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 102

Conread position: 190-433
Cow position: chr8:47128777-47129016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 230, 29

Conread position: 190-441
Cow position: chr8:15870900-15870650 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 101

Conread position: 191-434
Cow position: chr8:20672231-20671992 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 64

Conread position: 192-441
Cow position: chr8:51633995-51633744 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 9

Conread position: 201-431
Cow position: chr8:36608826-36608602 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 50

Conread position: 201-433
Cow position: chr8:60055564-60055335 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 67

Conread position: 201-435
Cow position: chr8:16648485-16648251 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 23

Conread position: 201-441
Cow position: chr8:12790663-12790441 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 19

Conread position: 201-441
Cow position: chr8:42151774-42151546 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 69

Conread position: 204-403
Cow position: chr8:51443334-51443142 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 47

Conread position: 204-423
Cow position: chr8:59472960-59472739 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 87

Conread position: 205-389
Cow position: chr8:11974680-11974860 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 214-438
Cow position: chr8:18810658-18810882 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 201, 46

Conread position: 214-441
Cow position: chr8:14617669-14617436 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 46

Conread position: 218-393
Cow position: chr8:40698043-40697867 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 72

Conread position: 218-422
Cow position: chr8:38987092-38987296 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 37, 56

Conread position: 220-438
Cow position: chr8:6508043-6507824 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 44

Conread position: 225-437
Cow position: chr8:1386221-1386426 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 227-424
Cow position: chr8:31289017-31288822 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 192, 62

Conread position: 238-433
Cow position: chr8:51877703-51877508 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 122, 17

Conread position: 253-441
Cow position: chr8:18883092-18883280 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 138, 36

Conread position: 254-438
Cow position: chr8:34439731-34439916 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 20

Conread position: 254-441
Cow position: chr8:53359693-53359502 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 40

Conread position: 259-379
Cow position: chr8:31185284-31185403 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 259-418
Cow position: chr8:19772757-19772908 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 266-441
Cow position: chr8:6763999-6763827 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 128, 23

Conread position: 272-430
Cow position: chr8:28387487-28387336 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 22

Conread position: 302-441
Cow position: chr8:9672193-9672341 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.