Cow genome map
Conread name: | rfbs3925b_o12.y1 |
Conread position: | 1-113 |
Cow position: | chr8:24517410-24517296 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 18 |
Conread position: | 1-137 |
Cow position: | chr8:19876777-19876638 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-209 |
Cow position: | chr8:44857500-44857704 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 57, 139 |
Conread position: | 1-236 |
Cow position: | chr8:8480906-8480684 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 176 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 58, 37 |
Conread position: | 1-258 |
Cow position: | chr8:19772531-19772773 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 191 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 53, 69 |
Conread position: | 1-287 |
Cow position: | chr8:21119239-21118958 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 57, 44 |
Conread position: | 1-306 |
Cow position: | chr8:27369121-27369410 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 136 |
Conread position: | 1-324 |
Cow position: | chr8:11792230-11792556 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 148 |
Conread position: | 1-378 |
Cow position: | chr8:21078574-21078927 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 45 |
Conread position: | 1-424 |
Cow position: | chr8:54158766-54159175 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 141 |
Conread position: | 1-431 |
Cow position: | chr8:45686398-45686014 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 306 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 57, 81 |
Conread position: | 1-433 |
Cow position: | chr8:23441099-23440661 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 1-438 |
Cow position: | chr8:19369453-19369054 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 67 |
Conread position: | 1-438 |
Cow position: | chr8:22103163-22102736 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 82 |
Conread position: | 1-438 |
Cow position: | chr8:30021883-30021470 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 68 |
Conread position: | 1-438 |
Cow position: | chr8:33437826-33438239 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 60 |
Conread position: | 1-441 |
Cow position: | chr8:2974685-2975126 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 17 |
Conread position: | 1-441 |
Cow position: | chr8:48682461-48682041 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 135 |
Conread position: | 2-207 |
Cow position: | chr8:59137866-59137667 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 56, 144 |
Conread position: | 2-229 |
Cow position: | chr8:49384605-49384827 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 165 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 4-140 |
Cow position: | chr8:41951635-41951775 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 4-149 |
Cow position: | chr8:12790807-12790659 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 55, 77 |
Conread position: | 5-438 |
Cow position: | chr8:4337033-4336605 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 65 |
Conread position: | 5-438 |
Cow position: | chr8:40432828-40432415 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 81 |
Conread position: | 21-439 |
Cow position: | chr8:7104364-7103960 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 126 |
Conread position: | 82-441 |
Cow position: | chr8:5874267-5874599 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 60 |
Conread position: | 91-418 |
Cow position: | chr8:40273516-40273208 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 241, 8 |
Conread position: | 98-441 |
Cow position: | chr8:18725343-18725661 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 246 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 123, 42 |
Conread position: | 105-382 |
Cow position: | chr8:20341571-20341317 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 156, 34 |
Conread position: | 149-438 |
Cow position: | chr8:952208-952481 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 215 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 151-438 |
Cow position: | chr8:53891691-53891985 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 216 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 45, 135 |
Conread position: | 170-432 |
Cow position: | chr8:20286772-20287038 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 188 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 23, 42 |
Conread position: | 170-438 |
Cow position: | chr8:18801424-18801690 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 197 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 62, 9 |
Conread position: | 176-441 |
Cow position: | chr8:54828438-54828695 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 177-422 |
Cow position: | chr8:39097927-39097678 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 28, 100 |
Conread position: | 177-432 |
Cow position: | chr8:37381342-37381587 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 186 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 30, 10 |
Conread position: | 181-350 |
Cow position: | chr8:9985929-9986095 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 182-430 |
Cow position: | chr8:21945625-21945874 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 15, 5 |
Conread position: | 186-438 |
Cow position: | chr8:33819028-33818781 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 185 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 190-418 |
Cow position: | chr8:36686877-36687106 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 160 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 18, 72 |
Conread position: | 190-424 |
Cow position: | chr8:41411436-41411671 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 169 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 17, 102 |
Conread position: | 190-433 |
Cow position: | chr8:47128777-47129016 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 175 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 230, 29 |
Conread position: | 190-441 |
Cow position: | chr8:15870900-15870650 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 169 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 25, 101 |
Conread position: | 191-434 |
Cow position: | chr8:20672231-20671992 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 30, 64 |
Conread position: | 192-441 |
Cow position: | chr8:51633995-51633744 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 189 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 24, 9 |
Conread position: | 201-431 |
Cow position: | chr8:36608826-36608602 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 163 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 18, 50 |
Conread position: | 201-433 |
Cow position: | chr8:60055564-60055335 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 18, 67 |
Conread position: | 201-435 |
Cow position: | chr8:16648485-16648251 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 201-441 |
Cow position: | chr8:12790663-12790441 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 177 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 110, 19 |
Conread position: | 201-441 |
Cow position: | chr8:42151774-42151546 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 14, 69 |
Conread position: | 204-403 |
Cow position: | chr8:51443334-51443142 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 15, 47 |
Conread position: | 204-423 |
Cow position: | chr8:59472960-59472739 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 15, 87 |
Conread position: | 205-389 |
Cow position: | chr8:11974680-11974860 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 129 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 214-438 |
Cow position: | chr8:18810658-18810882 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 168 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 201, 46 |
Conread position: | 214-441 |
Cow position: | chr8:14617669-14617436 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 179 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 65, 46 |
Conread position: | 218-393 |
Cow position: | chr8:40698043-40697867 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 125 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 44, 72 |
Conread position: | 218-422 |
Cow position: | chr8:38987092-38987296 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 155 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 37, 56 |
Conread position: | 220-438 |
Cow position: | chr8:6508043-6507824 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 144, 44 |
Conread position: | 225-437 |
Cow position: | chr8:1386221-1386426 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 146 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 227-424 |
Cow position: | chr8:31289017-31288822 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 137 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 192, 62 |
Conread position: | 238-433 |
Cow position: | chr8:51877703-51877508 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 152 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 122, 17 |
Conread position: | 253-441 |
Cow position: | chr8:18883092-18883280 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 147 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 138, 36 |
Conread position: | 254-438 |
Cow position: | chr8:34439731-34439916 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 55, 20 |
Conread position: | 254-441 |
Cow position: | chr8:53359693-53359502 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 144 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 56, 40 |
Conread position: | 259-379 |
Cow position: | chr8:31185284-31185403 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 259-418 |
Cow position: | chr8:19772757-19772908 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 266-441 |
Cow position: | chr8:6763999-6763827 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 128, 23 |
Conread position: | 272-430 |
Cow position: | chr8:28387487-28387336 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 123, 22 |
Conread position: | 302-441 |
Cow position: | chr8:9672193-9672341 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.