Cow genome map


           Conread name:
           rfbs3925b_o12.y1
        

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 40
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 128
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 140
               

               Conread position:
               2-136
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-247
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 33
               

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               7-438
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               22-198
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 118
               

               Conread position:
               22-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               25-324
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               59-438
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               69-378
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               92-413
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               96-439
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               323, 42
               

               Conread position:
               97-438
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 18
               

               Conread position:
               98-435
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               151-441
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               153-438
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               154-441
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               157-415
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               238, 39
               

               Conread position:
               164-438
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               167-441
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               177-392
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               181-441
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               190-441
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               191-394
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               192-441
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               193-441
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               202, 21
               

               Conread position:
               196-437
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               197-370
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               201-424
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               201-424
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               204-428
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               204-441
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               205-415
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               239-433
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               245-438
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               257-435
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               258-441
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               259-429
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               272-435
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               272-441
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               273-438
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               280-424
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               285-438
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               295-441
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               66, 62
               

               Conread position:
               318-438
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               320-438
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 0
               
Show alignments to all cow chromosomes.