Cow genome map


           Conread name:
           rfbs3927b_f22.y1
        

               Conread position:
               2-474
               

               Cow position:
               chr27:20641025-20641512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 59
               

               Conread position:
               48-434
               

               Cow position:
               chr27:21668853-21669252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 13
               

               Conread position:
               51-301
               

               Cow position:
               chr27:6550721-6550486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               55-434
               

               Cow position:
               chr27:7412649-7412258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 150
               

               Conread position:
               79-454
               

               Cow position:
               chr27:16284715-16284319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               105-434
               

               Cow position:
               chr27:22179581-22179901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               152, 90
               

               Conread position:
               106-341
               

               Cow position:
               chr27:27528146-27528373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               227, 89
               

               Conread position:
               108-341
               

               Cow position:
               chr27:16871706-16871932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               198-462
               

               Cow position:
               chr27:16589580-16589868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.