Cow genome map


           Conread name:
           rfbs3927b_f22.y1
        

               Conread position:
               1-434
               

               Cow position:
               chr28:3745846-3746298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 61
               

               Conread position:
               2-329
               

               Cow position:
               chr28:21672457-21672763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               3-434
               

               Cow position:
               chr28:5129067-5128632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               304, 59
               

               Conread position:
               7-458
               

               Cow position:
               chr28:5684353-5684822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 54
               

               Conread position:
               10-341
               

               Cow position:
               chr28:33884062-33884380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               114-432
               

               Cow position:
               chr28:14649102-14649436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               117-434
               

               Cow position:
               chr28:26220019-26220352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 142
               

               Conread position:
               163-462
               

               Cow position:
               chr28:4809597-4809905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               173-462
               

               Cow position:
               chr28:11829129-11828837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               154, 22
               

               Conread position:
               203-433
               

               Cow position:
               chr28:24017834-24018079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 19
               
Show alignments to all cow chromosomes.