Cow genome map


           Conread name:
           rfbs3927b_f22.y1
        

               Conread position:
               1-313
               

               Cow position:
               chr5:47871388-47871082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               1-345
               

               Cow position:
               chr5:15363556-15363885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-434
               

               Cow position:
               chr5:30276358-30276807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 60
               

               Conread position:
               2-433
               

               Cow position:
               chr5:51357838-51357410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 59
               

               Conread position:
               5-335
               

               Cow position:
               chr5:61725638-61725961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 58
               

               Conread position:
               19-435
               

               Cow position:
               chr5:25035582-25035140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               119-434
               

               Cow position:
               chr5:56028750-56028424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               198-329
               

               Cow position:
               chr5:46426001-46425870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-430
               

               Cow position:
               chr5:35763138-35763375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               212-434
               

               Cow position:
               chr5:12673596-12673361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               92, 20
               
Show alignments to all cow chromosomes.