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Cow genome map

           
Conread name:
           
rfbs3931b_b22.y1
        

               
Conread position:
               
1-227
               

               
Cow position:
               
chr29:21941509-21941730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr29:23813126-23812846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr29:4120758-4121059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr29:26017592-26017297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
184, 38
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr29:9709605-9709903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr29:25333551-25333346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr29:6286247-6286038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
169, 55
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr29:17409246-17409461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr29:30713798-30713551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr29:27618791-27619056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr29:17168316-17168583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr29:13639459-13639184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr29:45589678-45589417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr29:13028348-13028637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr29:24045904-24046185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr29:24952599-24952881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr29:30188428-30188137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr29:2744361-2744074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr29:34745750-34745465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr29:23389645-23389369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:732528-732808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:4520246-4520531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:6337572-6337848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:11915731-11916019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:12025559-12025281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:16609653-16609948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:16657601-16657889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:17297045-17297336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:18878585-18878284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:19428570-19428848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:20167333-20167621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:22778266-22777983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:25474831-25475129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
174, 71
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:26269977-26270266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
182, 52
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:26477450-26477742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:29769440-29769156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:31674541-31674829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:35291999-35292284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:36530778-36531064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr29:44378504-44378209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr29:12680069-12680357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr29:22162342-22162065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr29:22613337-22613620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr29:5046563-5046855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr29:17222324-17222618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr29:40096874-40097182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr29:40994979-40994678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
184, 59
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr29:17154678-17154964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr29:35084311-35084021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:3711301-3711579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:4625086-4624795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:14112287-14112582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:15738431-15738146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:16272639-16272947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:20910783-20910485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:25284552-25284261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:28674796-28674499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:30227362-30227077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:38580888-38581195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr29:41530758-41531054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr29:23874370-23874666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr29:29475341-29475049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr29:40117479-40117773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr29:11398013-11397703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 58
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr29:35458867-35458559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr29:2055969-2056273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr29:5831125-5830805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr29:23697890-23698180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 55
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr29:20933619-20933902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr29:25814925-25814637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
182, 8
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr29:15947083-15947371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr29:29795472-29795211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
180, 68
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr29:26778793-26779069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr29:30440844-30441132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr29:5409227-5408944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr29:3237442-3237144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr29:29942817-29942522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr29:22068833-22068531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr29:34297656-34297373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr29:11647004-11647218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr29:8293000-8292717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr29:31489237-31489522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 5
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr29:37618215-37618506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr29:12784040-12783756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
159, 5
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr29:21196736-21196451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr29:24292786-24293071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 5
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr29:38440159-38440459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr29:20243893-20243602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
205, 5
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr29:5175873-5176178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 5
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr29:87100-86835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr29:6819532-6819810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr29:32894184-32894452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr29:35677631-35677343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
179, 106
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr29:5892758-5893045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr29:19949217-19949504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr29:20770259-20770543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
179, 101
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr29:8669284-8669541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr29:11434042-11434310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
169, 7
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr29:18556585-18556850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr29:22519210-22518923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr29:29057099-29057377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
165, 49
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr29:3584191-3583913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr29:20924824-20925113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
175, 38
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr29:13867291-13867087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr29:19250269-19250541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
12-303
               

               
Cow position:
               
chr29:36248956-36249241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
12-309
               

               
Cow position:
               
chr29:26334467-26334178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
13-303
               

               
Cow position:
               
chr29:36220448-36220746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr29:21443418-21443154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 58
               

               
Conread position:
               
14-303
               

               
Cow position:
               
chr29:42630044-42630320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
16-227
               

               
Cow position:
               
chr29:7103480-7103687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 52
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr29:12309936-12310136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr29:27911526-27911795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr29:27926709-27926977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
26-279
               

               
Cow position:
               
chr29:23825603-23825841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
26-301
               

               
Cow position:
               
chr29:31928920-31929188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
151, 86
               

               
Conread position:
               
27-272
               

               
Cow position:
               
chr29:38348095-38347855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
27-284
               

               
Cow position:
               
chr29:36632926-36632676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 23
               

               
Conread position:
               
27-298
               

               
Cow position:
               
chr29:18450199-18449940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 23
               

               
Conread position:
               
27-301
               

               
Cow position:
               
chr29:23155162-23155436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr29:32799772-32799493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
28-298
               

               
Cow position:
               
chr29:5995164-5994891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr29:501139-501398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr29:31786610-31786872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
31-299
               

               
Cow position:
               
chr29:22029018-22028762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
31-300
               

               
Cow position:
               
chr29:35405852-35405590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
31-303
               

               
Cow position:
               
chr29:28587389-28587647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr29:17462846-17462567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr29:29923636-29923366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr29:7966180-7966393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
32-299
               

               
Cow position:
               
chr29:43544661-43544406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
32-303
               

               
Cow position:
               
chr29:7109275-7109545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr29:11611780-11612057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
33-275
               

               
Cow position:
               
chr29:22184200-22184436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr29:39131522-39131277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr29:37438195-37437935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr29:4492382-4492635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr29:16290666-16290926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr29:23844777-23845043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr29:32656373-32656639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr29:32733240-32733505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
35-299
               

               
Cow position:
               
chr29:22167138-22166888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-303
               

               
Cow position:
               
chr29:36522420-36522150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
40-306
               

               
Cow position:
               
chr29:10058591-10058337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
42-298
               

               
Cow position:
               
chr29:35258933-35259179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
45-298
               

               
Cow position:
               
chr29:32307601-32307367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
46-281
               

               
Cow position:
               
chr29:23825260-23825031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr29:5568443-5568695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr29:22533913-22534167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
50-296
               

               
Cow position:
               
chr29:7956034-7955792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr29:18200740-18200983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr29:30827361-30827606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
50-304
               

               
Cow position:
               
chr29:27524879-27524630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr29:4070583-4070831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr29:5520528-5520283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
53-294
               

               
Cow position:
               
chr29:9310557-9310797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
53-299
               

               
Cow position:
               
chr29:36357087-36357327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
54-295
               

               
Cow position:
               
chr29:40610674-40610437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
56-303
               

               
Cow position:
               
chr29:26602151-26602403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
57-299
               

               
Cow position:
               
chr29:17109923-17110152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
57-303
               

               
Cow position:
               
chr29:3549565-3549808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
57-310
               

               
Cow position:
               
chr29:44684064-44684309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chr29:25874508-25874266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
59-228
               

               
Cow position:
               
chr29:16365924-16365755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
60-295
               

               
Cow position:
               
chr29:23711948-23711709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
60-310
               

               
Cow position:
               
chr29:22720686-22720437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr29:38581939-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr29:396379-396603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr29:20527197-20526959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr29:29189131-29188885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr29:23637712-23637476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr29:33321317-33321550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr29:38858246-38858011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr29:42883990-42883827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
63-265
               

               
Cow position:
               
chr29:24429876-24429672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 138
               

               
Conread position:
               
63-287
               

               
Cow position:
               
chr29:4423471-4423263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
63-290
               

               
Cow position:
               
chr29:21508389-21508157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
63-294
               

               
Cow position:
               
chr29:29324451-29324227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr29:3685550-3685323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr29:31981800-31982019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr29:36329477-36329712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr29:24188097-24187862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
63-302
               

               
Cow position:
               
chr29:20626535-20626772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr29:1933603-1933367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr29:29588958-29588722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr29:5139545-5139784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr29:17804503-17804739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr29:25268098-25268348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr29:29364089-29363855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
64-268
               

               
Cow position:
               
chr29:12900582-12900382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 46
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr29:5769761-5769973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr29:23115032-23114814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
64-299
               

               
Cow position:
               
chr29:35501684-35501466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
65-294
               

               
Cow position:
               
chr29:16278957-16279171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
65-310
               

               
Cow position:
               
chr29:38396332-38396574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
66-310
               

               
Cow position:
               
chr29:28420726-28420968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr29:1011608-1011392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr29:44938018-44937792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
68-286
               

               
Cow position:
               
chr29:34359848-34359640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
68-291
               

               
Cow position:
               
chr29:21706423-21706206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
68-293
               

               
Cow position:
               
chr29:26259450-26259669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
68-300
               

               
Cow position:
               
chr29:7124785-7125022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
69-300
               

               
Cow position:
               
chr29:28735071-28734847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
69-301
               

               
Cow position:
               
chr29:11227415-11227180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
69-301
               

               
Cow position:
               
chr29:22690199-22690428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr29:16652124-16652368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr29:19909930-19910172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr29:28814006-28813762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 128
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr29:31934353-31934584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
70-281
               

               
Cow position:
               
chr29:22723576-22723777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
70-310
               

               
Cow position:
               
chr29:25944328-25944084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
70-310
               

               
Cow position:
               
chr29:25950184-25949945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
108, 188
               

               
Conread position:
               
71-295
               

               
Cow position:
               
chr29:31651387-31651597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr29:8163850-8163624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
113, 33
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr29:29545986-29546221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr29:33511750-33511529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
74-310
               

               
Cow position:
               
chr29:34832406-34832183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
75-298
               

               
Cow position:
               
chr29:32656113-32655896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr29:4053358-4053136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
78-272
               

               
Cow position:
               
chr29:20780995-20781192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
78-303
               

               
Cow position:
               
chr29:38754956-38754735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chr29:29974030-29973838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
79-303
               

               
Cow position:
               
chr29:16200494-16200273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
79-310
               

               
Cow position:
               
chr29:23876850-23876621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
80-299
               

               
Cow position:
               
chr29:9378622-9378834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
80-310
               

               
Cow position:
               
chr29:29183702-29183933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
81-295
               

               
Cow position:
               
chr29:3292934-3293138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
82-298
               

               
Cow position:
               
chr29:21933134-21932923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
82-298
               

               
Cow position:
               
chr29:36781317-36781112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
83-301
               

               
Cow position:
               
chr29:5953871-5953655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
86-298
               

               
Cow position:
               
chr29:19176922-19176717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr29:23913400-23913210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
89-301
               

               
Cow position:
               
chr29:26411475-26411269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
90-301
               

               
Cow position:
               
chr29:17436744-17436950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
199, 16
               

               
Conread position:
               
94-294
               

               
Cow position:
               
chr29:8634647-8634846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 121
               

               
Conread position:
               
95-303
               

               
Cow position:
               
chr29:17085682-17085478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
95-305
               

               
Cow position:
               
chr29:19420613-19420415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
96-303
               

               
Cow position:
               
chr29:44901667-44901458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
97-297
               

               
Cow position:
               
chr29:40351075-40350883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
97-303
               

               
Cow position:
               
chr29:14828234-14828026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr29:42886977-42887174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
111-310
               

               
Cow position:
               
chr29:34675999-34675797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 140
               

               
Conread position:
               
113-292
               

               
Cow position:
               
chr29:22652335-22652511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
113-297
               

               
Cow position:
               
chr29:4441191-4441008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr29:28715221-28715033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr29:22577167-22576975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
114-301
               

               
Cow position:
               
chr29:23142320-23142131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr29:33393692-33393871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr29:24365882-24365713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
115-294
               

               
Cow position:
               
chr29:26539249-26539425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
115-295
               

               
Cow position:
               
chr29:23819376-23819189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr29:4648195-4648014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr29:19363725-19363906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr29:22735434-22735250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr29:26540526-26540342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
115-301
               

               
Cow position:
               
chr29:19187040-19187227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr29:9800664-9800861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:13558347-13558540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:14375867-14375676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:14746794-14746981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:25793160-25793345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:26211066-26211256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr29:32713175-32713367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr29:14576873-14577067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr29:24065701-24065894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
119-301
               

               
Cow position:
               
chr29:20685187-20685372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
123-298
               

               
Cow position:
               
chr29:19125344-19125528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr29:42756426-42756612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
124-298
               

               
Cow position:
               
chr29:16735247-16735424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr29:8798992-8798808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr29:26631064-26631252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr29:35189630-35189812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
125-301
               

               
Cow position:
               
chr29:42404971-42405150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
125-303
               

               
Cow position:
               
chr29:936231-936406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
129-297
               

               
Cow position:
               
chr29:16561742-16561577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
129-310
               

               
Cow position:
               
chr29:22019159-22018976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
136-278
               

               
Cow position:
               
chr29:28257176-28257320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
136-287
               

               
Cow position:
               
chr29:17663726-17663571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr29:11081361-11081200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr29:43088343-43088500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
136-298
               

               
Cow position:
               
chr29:21645347-21645515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
136-299
               

               
Cow position:
               
chr29:38732188-38732354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr29:8605900-8605735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr29:11894733-11894905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
136-306
               

               
Cow position:
               
chr29:6517264-6517436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr29:685138-684968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
137-265
               

               
Cow position:
               
chr29:28279251-28279120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
138-296
               

               
Cow position:
               
chr29:16438742-16438576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr29:7040835-7040670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr29:25907283-25907450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-301
               

               
Cow position:
               
chr29:4484133-4484298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr29:24604933-24605105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
139-303
               

               
Cow position:
               
chr29:30123466-30123299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
140-300
               

               
Cow position:
               
chr29:30920364-30920200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr29:30294833-30294659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
142-303
               

               
Cow position:
               
chr29:11685208-11685372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
144-303
               

               
Cow position:
               
chr29:28087718-28087877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
145-299
               

               
Cow position:
               
chr29:8841400-8841250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
148-299
               

               
Cow position:
               
chr29:7285501-7285652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr29:23735040-23734885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
150-303
               

               
Cow position:
               
chr29:24119451-24119295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
152-303
               

               
Cow position:
               
chr29:35281515-35281675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
153-301
               

               
Cow position:
               
chr29:10994564-10994712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chr29:4741333-4741178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chr29:10838999-10839149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
160-310
               

               
Cow position:
               
chr29:20643974-20644126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
163-310
               

               
Cow position:
               
chr29:16164374-16164223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
168-286
               

               
Cow position:
               
chr29:35663849-35663730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
173-297
               

               
Cow position:
               
chr29:6716439-6716315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-303
               

               
Cow position:
               
chr29:41844175-41844047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-298
               

               
Cow position:
               
chr29:774068-774188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-310
               

               
Cow position:
               
chr29:31835352-31835478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
183-303
               

               
Cow position:
               
chr29:34483542-34483422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-303
               

               
Cow position:
               
chr29:26777095-26777213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-294
               

               
Cow position:
               
chr29:7452334-7452435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
192-305
               

               
Cow position:
               
chr29:659376-659486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
212-301
               

               
Cow position:
               
chr29:2720943-2720854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.