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Cow genome map

           
Conread name:
           
rfbs3931b_b22.y1
        

               
Conread position:
               
1-232
               

               
Cow position:
               
chr9:11319516-11319739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 36
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr9:54493255-54492974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr9:3356639-3356927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr9:21460035-21460326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr9:51717465-51717766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr9:20755640-20755936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr9:32676797-32676494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:35375544-35375360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr9:5509838-5509650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr9:33697145-33696953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr9:17411075-17411289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
184, 61
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr9:63745927-63745719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr9:55084181-55084400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr9:21888283-21888067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr9:35105673-35105891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
174, 55
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr9:8534574-8534798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:1520621-1520842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:17518374-17518592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
177, 37
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:22696337-22696120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:31638525-31638760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:39681456-39681235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
174, 59
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:50139401-50139184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:50543306-50543528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 126
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr9:59386657-59386883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr9:42445863-42446128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 111
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr9:46930575-46930310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr9:44833850-44834117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr9:38846227-38846497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr9:33043413-33043697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr9:9815531-9815255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr9:22443511-22443781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr9:29185016-29185298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr9:34957938-34958210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 12
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr9:4630221-4629950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
5, 23
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr9:5836271-5835991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr9:9552209-9551929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr9:8723910-8723635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr9:55438308-55438593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr9:9753277-9753564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr9:8901107-8901394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
172, 116
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr9:9723767-9724044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr9:22151966-22152247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
174, 108
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr9:30402304-30402594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:36490775-36491070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:41283130-41282846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
184, 56
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:42497942-42497662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:47906164-47906451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:48628145-48627857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:49764773-49764479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:51720786-51721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
178, 58
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr9:64106023-64105737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr9:11969304-11969019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr9:17799746-17799467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 118
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr9:34286919-34286629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 106
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:647893-647603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:1751454-1751159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
185, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:5327372-5327092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:9461539-9461837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
208, 66
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:13169545-13169835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:27279425-27279136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 48
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:33114463-33114169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 43
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:33584566-33584854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
184, 94
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:50977131-50977426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr9:51620554-51620274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
184, 56
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr9:28747406-28747689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr9:61303120-61302832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr9:62724653-62724371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 116
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:7409894-7409604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:12910285-12910573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
177, 56
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:13743816-13744107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:20901008-20901291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:25583947-25583658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:26057325-26057602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:38793130-38792840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:40005592-40005304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr9:44396775-44396486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 48
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr9:17871990-17872281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 106
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:4512605-4512302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:9311976-9311684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:11168846-11168570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
156, 56
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:15215569-15215865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:16121288-16120998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:21030425-21030129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:22318467-22318186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:25964714-25965015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:26477332-26477037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:28917363-28917660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:29091911-29091595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:30477665-30477947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:32019216-32019502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:40215358-40215072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:43207263-43207553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 46
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:44709941-44709658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:48730544-48730253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 9
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr9:63905494-63905790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr9:26279055-26279353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
184, 47
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr9:41728375-41728080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr9:8998473-8998170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
59, 120
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:5456061-5456353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:6189255-6189544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:6840118-6839808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:32669831-32670127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:34410279-34410575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 48
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:34697189-34697484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:38941315-38941619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:45141485-45141778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:47445911-47446190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:48118579-48118858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
216, 48
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:53109369-53109068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:53762814-53762517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr9:58979514-58979222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
219, 56
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:45756481-45756279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
172, 8
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr9:26434940-26435156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr9:27029587-27029805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr9:18827938-18828156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr9:64050445-64050665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr9:41394534-41394795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr9:55287777-55288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr9:38645227-38645507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
183, 87
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr9:42062218-42061926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr9:61739038-61738751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr9:1877892-1878168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr9:25557086-25556813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr9:40507489-40507763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
184, 37
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr9:1729557-1729860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr9:51566379-51566671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 36
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr9:12281088-12280798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
171, 7
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr9:15805804-15806101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr9:38624510-38624799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr9:47590864-47591159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr9:3186242-3185972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
182, 59
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr9:31347070-31346788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr9:28726606-28726893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
175, 109
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr9:9358927-9358648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr9:6338910-6338618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
180, 46
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr9:10905697-10905995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr9:11123368-11123655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 68
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr9:53281080-53281383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr9:45285413-45285709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr9:13670749-13670461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr9:43871090-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
169, 5
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr9:23788549-23788350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 7
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr9:62668363-62668148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr9:29006674-29006405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr9:12225865-12226149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr9:19903191-19902927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr9:9573443-9573150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr9:11303970-11304260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
174, 5
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr9:45728890-45728607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
170, 5
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr9:33940716-33940425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
170, 5
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr9:5899850-5900127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
173, 5
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr9:46981118-46981395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr9:53139021-53139308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
170, 5
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr9:20942498-20942793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr9:52511226-52510939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr9:6397670-6397967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 5
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr9:28452046-28452351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 5
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr9:35128607-35128295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr9:20091159-20090890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr9:45445276-45444984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr9:52407278-52406995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr9:23955872-23956159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
8-303
               

               
Cow position:
               
chr9:53257939-53258231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr9:35652357-35652649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr9:52754747-52755025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr9:28379078-28378864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr9:41679854-41679596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr9:26440702-26440984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
10-299
               

               
Cow position:
               
chr9:18426025-18425740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr9:60394942-60395223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr9:8920106-8919830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
11-292
               

               
Cow position:
               
chr9:33218842-33219121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr9:13994279-13993989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr9:3573576-3573289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr9:22638210-22637923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr9:31626257-31625956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
12-302
               

               
Cow position:
               
chr9:49863444-49863732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 37
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr9:35028063-35028337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr9:56262008-56262284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr9:56032219-56032490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
22-300
               

               
Cow position:
               
chr9:37016993-37016729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
23-286
               

               
Cow position:
               
chr9:33838215-33838466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr9:26102817-26102554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
264, 35
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:37139136-37138897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr9:31557636-31557899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr9:37199216-37198957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
160, 24
               

               
Conread position:
               
26-303
               

               
Cow position:
               
chr9:29819808-29819551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr9:28354612-28354420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr9:64064265-64064466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
27-284
               

               
Cow position:
               
chr9:5469954-5469713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
27-286
               

               
Cow position:
               
chr9:25400105-25400345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr9:26086155-26085891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr9:26403876-26403629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
27-298
               

               
Cow position:
               
chr9:8834038-8834301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
27-298
               

               
Cow position:
               
chr9:9443512-9443772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
159, 33
               

               
Conread position:
               
27-303
               

               
Cow position:
               
chr9:35832524-35832791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr9:6933982-6934264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
28-298
               

               
Cow position:
               
chr9:58662329-58662073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
30-282
               

               
Cow position:
               
chr9:24652500-24652245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
30-308
               

               
Cow position:
               
chr9:5110948-5110676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
30-310
               

               
Cow position:
               
chr9:34344698-34344427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr9:8716681-8716955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr9:17840587-17840849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr9:28263605-28263347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr9:34024789-34024529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
31-303
               

               
Cow position:
               
chr9:6954159-6954428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr9:36410270-36410535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
32-279
               

               
Cow position:
               
chr9:34284038-34283802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr9:35167262-35167003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr9:63170056-63169801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr9:25804919-25804657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr9:27356012-27355748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr9:27358798-27358534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr9:33542142-33541896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
33-294
               

               
Cow position:
               
chr9:56065641-56065400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
33-299
               

               
Cow position:
               
chr9:50382239-50382489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr9:12398685-12398420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr9:35547357-35547090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
34-302
               

               
Cow position:
               
chr9:9686329-9686592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 21
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr9:7805879-7806120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
36-286
               

               
Cow position:
               
chr9:5163901-5164143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 36
               

               
Conread position:
               
36-298
               

               
Cow position:
               
chr9:34278972-34279229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
38-299
               

               
Cow position:
               
chr9:1371009-1370764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
40-298
               

               
Cow position:
               
chr9:8628837-8629082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
40-303
               

               
Cow position:
               
chr9:16300485-16300749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
41-293
               

               
Cow position:
               
chr9:33823199-33822952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
45-298
               

               
Cow position:
               
chr9:12337982-12337730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
46-294
               

               
Cow position:
               
chr9:54664925-54664682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr9:54986084-54986323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr9:54411086-54411335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr9:6859801-6859548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr9:47517267-47517024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr9:17276819-17277067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr9:17677039-17677292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr9:32387913-32388160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
53-298
               

               
Cow position:
               
chr9:44584662-44584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
53-298
               

               
Cow position:
               
chr9:52484851-52485084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
55-272
               

               
Cow position:
               
chr9:56827550-56827330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
55-298
               

               
Cow position:
               
chr9:19034412-19034184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
56-286
               

               
Cow position:
               
chr9:55529860-55529645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
56-303
               

               
Cow position:
               
chr9:12681180-12680937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr9:48451775-48451564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
57-310
               

               
Cow position:
               
chr9:32661960-32662218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
58-295
               

               
Cow position:
               
chr9:63700709-63700933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr9:32348750-32348997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr9:44822261-44822499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
60-289
               

               
Cow position:
               
chr9:18215849-18216073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
60-310
               

               
Cow position:
               
chr9:28156755-28156517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 58
               

               
Conread position:
               
61-286
               

               
Cow position:
               
chr9:10010870-10010654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr9:4341098-4341326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr9:5104342-5104580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr9:12786412-12786646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr9:31359663-31359434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr9:35188207-35188445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr9:8547875-8547636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr9:8992118-8992354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr9:42264275-42264039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
62-295
               

               
Cow position:
               
chr9:7805834-7805617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr9:33347430-33347652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
227, 58
               

               
Conread position:
               
62-299
               

               
Cow position:
               
chr9:36628177-36627951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr9:45749501-45749259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
63-282
               

               
Cow position:
               
chr9:58368939-58369147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
63-284
               

               
Cow position:
               
chr9:62471739-62471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
63-287
               

               
Cow position:
               
chr9:43623326-43623106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr9:63784855-63785074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
63-294
               

               
Cow position:
               
chr9:54183461-54183686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr9:58672500-58672271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr9:22408815-22408587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr9:48017039-48016819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr9:50310708-50310933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
63-299
               

               
Cow position:
               
chr9:39011410-39011638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr9:47214487-47214722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:12094541-12094303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:20322040-20322267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:20451569-20451805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:30012932-30012696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:33598046-33597798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:43048560-43048792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:52131069-52130836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
234, 50
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr9:62145120-62144876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr9:35844952-35845200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr9:40303075-40303316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chr9:31513880-31514091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr9:22289821-22289605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr9:41964675-41964890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr9:33151799-33151579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:13945663-13945427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:35049530-35049305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
198, 8
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:52689553-52689789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:52763703-52763928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:64629308-64629539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
64-306
               

               
Cow position:
               
chr9:22433871-22434104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
64-310
               

               
Cow position:
               
chr9:11309924-11309676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 225
               

               
Conread position:
               
65-278
               

               
Cow position:
               
chr9:55494929-55495139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
65-293
               

               
Cow position:
               
chr9:7611735-7611952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr9:32815709-32815485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
65-298
               

               
Cow position:
               
chr9:54677314-54677087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
65-303
               

               
Cow position:
               
chr9:37934178-37934414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
65-307
               

               
Cow position:
               
chr9:34768683-34768444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
65-310
               

               
Cow position:
               
chr9:44758875-44759108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
65-310
               

               
Cow position:
               
chr9:63853266-63853022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
67-297
               

               
Cow position:
               
chr9:61544706-61544494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
195, 43
               

               
Conread position:
               
68-304
               

               
Cow position:
               
chr9:39135574-39135795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr9:36843850-36843624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
69-292
               

               
Cow position:
               
chr9:32307180-32307398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
69-297
               

               
Cow position:
               
chr9:5342195-5342415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr9:20406697-20406485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr9:31216137-31215909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
69-299
               

               
Cow position:
               
chr9:4241459-4241236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
69-303
               

               
Cow position:
               
chr9:25375683-25375908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
69-309
               

               
Cow position:
               
chr9:14974866-14975108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr9:14738302-14738070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr9:48564137-48563898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr9:58448064-58448308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
70-301
               

               
Cow position:
               
chr9:39709909-39709679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
70-301
               

               
Cow position:
               
chr9:44624323-44624539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
71-284
               

               
Cow position:
               
chr9:7859586-7859794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr9:23970845-23971063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr9:34484646-34484420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
71-301
               

               
Cow position:
               
chr9:48017723-48017940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
72-310
               

               
Cow position:
               
chr9:16811604-16811843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr9:38865934-38866136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 40
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr9:8767367-8767585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr9:41644700-41644928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
74-301
               

               
Cow position:
               
chr9:27345536-27345762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
75-292
               

               
Cow position:
               
chr9:8937199-8936984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
75-295
               

               
Cow position:
               
chr9:39149126-39148915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
75-303
               

               
Cow position:
               
chr9:36458048-36457821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
75-309
               

               
Cow position:
               
chr9:14882086-14882317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr9:53124135-53123929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
77-279
               

               
Cow position:
               
chr9:20637418-20637224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr9:24887250-24887035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
79-302
               

               
Cow position:
               
chr9:62859725-62859507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
79-303
               

               
Cow position:
               
chr9:20318529-20318749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
79-310
               

               
Cow position:
               
chr9:36453497-36453720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
79-310
               

               
Cow position:
               
chr9:52030521-52030298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
80-294
               

               
Cow position:
               
chr9:21292365-21292573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
80-299
               

               
Cow position:
               
chr9:32858590-32858815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
83-284
               

               
Cow position:
               
chr9:48115718-48115527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
84-286
               

               
Cow position:
               
chr9:28342602-28342813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
84-303
               

               
Cow position:
               
chr9:8613173-8613388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
84-303
               

               
Cow position:
               
chr9:29984502-29984286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
85-310
               

               
Cow position:
               
chr9:26558011-26557781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr9:43680156-43679959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
87-303
               

               
Cow position:
               
chr9:45484146-45483934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
89-286
               

               
Cow position:
               
chr9:7101475-7101276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
89-310
               

               
Cow position:
               
chr9:9091066-9091292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
90-287
               

               
Cow position:
               
chr9:37955139-37955333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
92-301
               

               
Cow position:
               
chr9:31344577-31344783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
92-303
               

               
Cow position:
               
chr9:54940396-54940602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
93-294
               

               
Cow position:
               
chr9:5220781-5220982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr9:30138149-30137953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr9:12355821-12355613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 179
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr9:1367314-1367520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
100-302
               

               
Cow position:
               
chr9:28315455-28315250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
101-303
               

               
Cow position:
               
chr9:22309226-22309024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
101-303
               

               
Cow position:
               
chr9:35209719-35209514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
102-301
               

               
Cow position:
               
chr9:44625237-44625046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
103-310
               

               
Cow position:
               
chr9:34196215-34196012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
106-282
               

               
Cow position:
               
chr9:58440347-58440533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 155
               

               
Conread position:
               
106-299
               

               
Cow position:
               
chr9:12773713-12773523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
108-303
               

               
Cow position:
               
chr9:32878071-32877883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr9:4263071-4263268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 108
               

               
Conread position:
               
110-310
               

               
Cow position:
               
chr9:43352994-43352792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
112-298
               

               
Cow position:
               
chr9:49680130-49679940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr9:8468072-8467889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
114-294
               

               
Cow position:
               
chr9:9243565-9243378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr9:9459999-9459819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr9:35932802-35932984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
115-286
               

               
Cow position:
               
chr9:1712693-1712866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
115-286
               

               
Cow position:
               
chr9:52998367-52998536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
115-286
               

               
Cow position:
               
chr9:61909401-61909226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-289
               

               
Cow position:
               
chr9:3847415-3847234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-294
               

               
Cow position:
               
chr9:5772664-5772846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-294
               

               
Cow position:
               
chr9:46344949-46344759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-295
               

               
Cow position:
               
chr9:44314693-44314875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
115-296
               

               
Cow position:
               
chr9:34707299-34707479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:16216994-16216808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:34374911-34375097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:35466509-35466699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 184
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:59586324-59586145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:59897602-59897426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr9:62631658-62631837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
115-301
               

               
Cow position:
               
chr9:34276197-34276386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-301
               

               
Cow position:
               
chr9:41470085-41470274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr9:9557699-9557509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr9:40603681-40603493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr9:40984518-40984329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr9:7543246-7543432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr9:1884117-1884324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr9:5068854-5068655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr9:8645280-8645082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr9:19718327-19718516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr9:35295703-35295512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr9:37950884-37951083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr9:14357427-14357253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr9:16115596-16115772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr9:28718724-28718550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
116-297
               

               
Cow position:
               
chr9:12495226-12495045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
116-297
               

               
Cow position:
               
chr9:55892253-55892436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
116-298
               

               
Cow position:
               
chr9:6929779-6929965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
116-298
               

               
Cow position:
               
chr9:17785554-17785740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
116-298
               

               
Cow position:
               
chr9:22447282-22447464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
116-301
               

               
Cow position:
               
chr9:1403524-1403710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
116-301
               

               
Cow position:
               
chr9:20815880-20815692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
116-303
               

               
Cow position:
               
chr9:40221174-40221359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr9:6447120-6446921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
117-294
               

               
Cow position:
               
chr9:24079313-24079139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 102
               

               
Conread position:
               
117-295
               

               
Cow position:
               
chr9:13993776-13993596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr9:34917174-34917346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
117-301
               

               
Cow position:
               
chr9:61286773-61286588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr9:151879-151690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
119-298
               

               
Cow position:
               
chr9:20017407-20017227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
119-310
               

               
Cow position:
               
chr9:49213409-49213217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
119-310
               

               
Cow position:
               
chr9:53061671-53061470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
121-303
               

               
Cow position:
               
chr9:17769324-17769146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
124-294
               

               
Cow position:
               
chr9:36634511-36634338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr9:27813224-27813047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr9:31694027-31694211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 174
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr9:54598677-54598500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr9:2397811-2397635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr9:6205337-6205520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
125-301
               

               
Cow position:
               
chr9:34964740-34964907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
125-303
               

               
Cow position:
               
chr9:18817707-18817888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
126-298
               

               
Cow position:
               
chr9:55013330-55013511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
128-310
               

               
Cow position:
               
chr9:61019362-61019547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr9:18163363-18163513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
136-286
               

               
Cow position:
               
chr9:64310784-64310937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
136-295
               

               
Cow position:
               
chr9:26394357-26394515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
136-298
               

               
Cow position:
               
chr9:11447816-11447977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
136-298
               

               
Cow position:
               
chr9:16826204-16826372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr9:27307890-27308049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr9:34760372-34760541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr9:51891238-51891076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
136-303
               

               
Cow position:
               
chr9:53631931-53632101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr9:27495229-27495049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr9:34362729-34362570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
137-295
               

               
Cow position:
               
chr9:63185704-63185864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
137-298
               

               
Cow position:
               
chr9:21780915-21780753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
138-289
               

               
Cow position:
               
chr9:11199947-11200102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr9:8573383-8573214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr9:13722148-13722311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr9:53323794-53323958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-301
               

               
Cow position:
               
chr9:62136124-62136290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr9:9432050-9431887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr9:20828896-20828729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr9:24000768-24000929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr9:34423611-34423443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr9:48046529-48046353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
139-298
               

               
Cow position:
               
chr9:27261401-27261563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
139-301
               

               
Cow position:
               
chr9:1984491-1984657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
139-303
               

               
Cow position:
               
chr9:47510581-47510745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-310
               

               
Cow position:
               
chr9:52257474-52257642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
139-310
               

               
Cow position:
               
chr9:60741195-60741367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
142-310
               

               
Cow position:
               
chr9:19656990-19657155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
144-310
               

               
Cow position:
               
chr9:26715239-26715069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
145-303
               

               
Cow position:
               
chr9:8537291-8537131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
147-298
               

               
Cow position:
               
chr9:20355848-20355698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
148-301
               

               
Cow position:
               
chr9:33389047-33389202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
149-298
               

               
Cow position:
               
chr9:50648046-50647899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chr9:44527097-44526934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chr9:45711021-45711179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chr9:52736928-52736773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chr9:54639840-54640001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
150-298
               

               
Cow position:
               
chr9:33034052-33033903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
150-306
               

               
Cow position:
               
chr9:39142826-39142671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
152-301
               

               
Cow position:
               
chr9:43345714-43345562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
153-298
               

               
Cow position:
               
chr9:45170406-45170554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
155-310
               

               
Cow position:
               
chr9:48367553-48367711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
159-296
               

               
Cow position:
               
chr9:34355808-34355945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
160-265
               

               
Cow position:
               
chr9:35360321-35360429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
161-310
               

               
Cow position:
               
chr9:26578235-26578388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
162-298
               

               
Cow position:
               
chr9:44793134-44793269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
162-301
               

               
Cow position:
               
chr9:52651523-52651665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
165-298
               

               
Cow position:
               
chr9:2985034-2984898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
171-298
               

               
Cow position:
               
chr9:901485-901611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
171-303
               

               
Cow position:
               
chr9:34875209-34875347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
174-298
               

               
Cow position:
               
chr9:6727001-6726877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
174-301
               

               
Cow position:
               
chr9:48343944-48344071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-301
               

               
Cow position:
               
chr9:59172989-59173116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-303
               

               
Cow position:
               
chr9:5399417-5399287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr9:63711112-63710977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
174-310
               

               
Cow position:
               
chr9:2945898-2945762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-303
               

               
Cow position:
               
chr9:28866142-28866268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-297
               

               
Cow position:
               
chr9:33201099-33201217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
178-299
               

               
Cow position:
               
chr9:34399618-34399499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
178-303
               

               
Cow position:
               
chr9:16770948-16770815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
179-294
               

               
Cow position:
               
chr9:38370423-38370310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
180-282
               

               
Cow position:
               
chr9:6667702-6667804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-310
               

               
Cow position:
               
chr9:3190821-3190949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
181-301
               

               
Cow position:
               
chr9:17906598-17906715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
183-298
               

               
Cow position:
               
chr9:58232379-58232494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-303
               

               
Cow position:
               
chr9:39551835-39551960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
183-309
               

               
Cow position:
               
chr9:60138737-60138614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 81
               

               
Conread position:
               
183-310
               

               
Cow position:
               
chr9:6687640-6687511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
189-303
               

               
Cow position:
               
chr9:11216238-11216350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
189-303
               

               
Cow position:
               
chr9:42043794-42043909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
189-309
               

               
Cow position:
               
chr9:51019119-51019004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
195-301
               

               
Cow position:
               
chr9:35491365-35491258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
209-303
               

               
Cow position:
               
chr9:29186013-29185919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
217-303
               

               
Cow position:
               
chr9:35932698-35932784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.