Cow genome map

Conread name: rfbs3931b_b22.y1

Conread position: 1-294
Cow position: chrX:42927881-42927606 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 54

Conread position: 1-298
Cow position: chrX:31250325-31250618 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 1-301
Cow position: chrX:18964886-18964603 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 185, 35

Conread position: 1-303
Cow position: chrX:25035441-25035148 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 48

Conread position: 1-310
Cow position: chrX:12095835-12095531 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 46

Conread position: 1-310
Cow position: chrX:46587758-46588061 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 71

Conread position: 2-214
Cow position: chrX:45884036-45883826 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 18

Conread position: 2-218
Cow position: chrX:42235589-42235376 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 117

Conread position: 2-222
Cow position: chrX:23562574-23562785 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 28

Conread position: 2-222
Cow position: chrX:46433430-46433643 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 58

Conread position: 2-225
Cow position: chrX:38728677-38728890 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 174, 68

Conread position: 2-225
Cow position: chrX:45113558-45113776 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 56

Conread position: 2-226
Cow position: chrX:11717849-11717626 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 118

Conread position: 2-227
Cow position: chrX:6278561-6278340 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 184, 70

Conread position: 2-227
Cow position: chrX:9416754-9416528 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 98

Conread position: 2-228
Cow position: chrX:17725913-17726135 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 184, 60

Conread position: 2-228
Cow position: chrX:43730279-43730063 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 171, 21

Conread position: 2-229
Cow position: chrX:6690317-6690100 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 174, 37

Conread position: 2-232
Cow position: chrX:31311968-31312192 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 184, 24

Conread position: 2-241
Cow position: chrX:14599472-14599704 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 40

Conread position: 2-254
Cow position: chrX:16416447-16416687 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 178, 67

Conread position: 2-260
Cow position: chrX:4515623-4515878 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 31

Conread position: 2-273
Cow position: chrX:1055455-1055178 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 120

Conread position: 2-275
Cow position: chrX:19965463-19965190 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 34

Conread position: 2-275
Cow position: chrX:27946117-27945848 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 70

Conread position: 2-278
Cow position: chrX:41068660-41068928 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 106

Conread position: 2-279
Cow position: chrX:31294624-31294360 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 56

Conread position: 2-279
Cow position: chrX:34502861-34503138 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 163, 58

Conread position: 2-282
Cow position: chrX:12309446-12309173 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 174, 34

Conread position: 2-283
Cow position: chrX:28878230-28877953 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 60

Conread position: 2-284
Cow position: chrX:47344233-47344513 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 182, 61

Conread position: 2-286
Cow position: chrX:1616105-1615842 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 2-286
Cow position: chrX:8731026-8731310 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 115

Conread position: 2-286
Cow position: chrX:10831554-10831265 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 134

Conread position: 2-286
Cow position: chrX:44703133-44702849 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 61

Conread position: 2-287
Cow position: chrX:32820969-32821257 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 181, 56

Conread position: 2-287
Cow position: chrX:40685392-40685112 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 184, 106

Conread position: 2-289
Cow position: chrX:13868642-13868923 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 174, 59

Conread position: 2-289
Cow position: chrX:27228067-27228348 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 184, 59

Conread position: 2-290
Cow position: chrX:20151789-20152068 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 125

Conread position: 2-291
Cow position: chrX:45875332-45875611 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 169, 59

Conread position: 2-292
Cow position: chrX:1466100-1466385 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 177, 61

Conread position: 2-293
Cow position: chrX:29601891-29601606 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 56

Conread position: 2-294
Cow position: chrX:1499606-1499878 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 2-294
Cow position: chrX:9635246-9634968 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 185, 38

Conread position: 2-294
Cow position: chrX:39220019-39220312 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 172, 30

Conread position: 2-294
Cow position: chrX:44396957-44397235 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 56

Conread position: 2-295
Cow position: chrX:48262548-48262830 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 182, 47

Conread position: 2-296
Cow position: chrX:38654493-38654206 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 67

Conread position: 2-296
Cow position: chrX:47873397-47873110 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 182, 47

Conread position: 2-297
Cow position: chrX:29542280-29542001 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-297
Cow position: chrX:36393405-36393114 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 105

Conread position: 2-297
Cow position: chrX:48236758-48237044 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 58

Conread position: 2-298
Cow position: chrX:5638229-5637951 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 2-298
Cow position: chrX:5872260-5872560 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 174, 29

Conread position: 2-298
Cow position: chrX:9252223-9251935 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 176, 56

Conread position: 2-298
Cow position: chrX:12249741-12250043 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 37

Conread position: 2-298
Cow position: chrX:14884019-14883729 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 169, 59

Conread position: 2-298
Cow position: chrX:25036926-25037220 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 64

Conread position: 2-298
Cow position: chrX:27394081-27393790 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 174, 21

Conread position: 2-298
Cow position: chrX:33466549-33466850 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 124, 47

Conread position: 2-298
Cow position: chrX:34313968-34314249 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 184, 71

Conread position: 2-298
Cow position: chrX:34411781-34412076 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 72

Conread position: 2-298
Cow position: chrX:40035504-40035214 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 177, 71

Conread position: 2-298
Cow position: chrX:41238412-41238134 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 24

Conread position: 2-298
Cow position: chrX:46072881-46072602 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 60

Conread position: 2-298
Cow position: chrX:47484326-47484030 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 182, 48

Conread position: 2-298
Cow position: chrX:48003786-48004074 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 181, 47

Conread position: 2-299
Cow position: chrX:4109129-4109414 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 56

Conread position: 2-299
Cow position: chrX:29050186-29050471 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 173, 116

Conread position: 2-299
Cow position: chrX:30133381-30133093 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 173, 48

Conread position: 2-299
Cow position: chrX:31515108-31515397 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 30

Conread position: 2-299
Cow position: chrX:40320347-40320637 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 31

Conread position: 2-300
Cow position: chrX:38321448-38321153 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 47

Conread position: 2-300
Cow position: chrX:38964044-38964327 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 2-301
Cow position: chrX:9201489-9201774 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 177, 58

Conread position: 2-301
Cow position: chrX:20168497-20168786 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 66

Conread position: 2-301
Cow position: chrX:21327845-21328145 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 113

Conread position: 2-301
Cow position: chrX:21593227-21593523 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 59

Conread position: 2-301
Cow position: chrX:27509084-27508793 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 59

Conread position: 2-301
Cow position: chrX:28013508-28013208 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 174, 58

Conread position: 2-301
Cow position: chrX:31489459-31489752 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 37

Conread position: 2-301
Cow position: chrX:38549386-38549678 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 172, 56

Conread position: 2-301
Cow position: chrX:40680550-40680846 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 125

Conread position: 2-301
Cow position: chrX:41027095-41027393 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 111

Conread position: 2-301
Cow position: chrX:46532562-46532259 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 121

Conread position: 2-302
Cow position: chrX:161352-161632 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 181, 37

Conread position: 2-303
Cow position: chrX:4296880-4296591 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 179, 48

Conread position: 2-303
Cow position: chrX:17231672-17231970 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 61

Conread position: 2-303
Cow position: chrX:17949548-17949259 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 169, 47

Conread position: 2-303
Cow position: chrX:20339950-20339662 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 37

Conread position: 2-303
Cow position: chrX:21642539-21642248 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 47

Conread position: 2-303
Cow position: chrX:21672495-21672798 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 55

Conread position: 2-303
Cow position: chrX:22813007-22813298 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 182, 30

Conread position: 2-303
Cow position: chrX:22921259-22921554 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 182, 47

Conread position: 2-303
Cow position: chrX:23514076-23513769 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 201, 45

Conread position: 2-303
Cow position: chrX:25815967-25815666 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 184, 18

Conread position: 2-303
Cow position: chrX:27174935-27175233 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 111

Conread position: 2-303
Cow position: chrX:27380292-27380593 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 47

Conread position: 2-303
Cow position: chrX:27705526-27705820 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 172, 40

Conread position: 2-303
Cow position: chrX:33000842-33001131 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 184, 61

Conread position: 2-303
Cow position: chrX:33855294-33854993 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 109

Conread position: 2-303
Cow position: chrX:35590818-35590525 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 2-303
Cow position: chrX:36061097-36061392 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 182, 56

Conread position: 2-303
Cow position: chrX:38094582-38094293 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 75, 113

Conread position: 2-303
Cow position: chrX:40826812-40826517 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 194, 48

Conread position: 2-304
Cow position: chrX:3654547-3654837 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 35

Conread position: 2-309
Cow position: chrX:14955825-14955526 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 174, 37

Conread position: 2-309
Cow position: chrX:41878993-41878696 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 8

Conread position: 2-309
Cow position: chrX:42855394-42855702 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 2-310
Cow position: chrX:151844-152145 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 185, 36

Conread position: 2-310
Cow position: chrX:2675018-2674718 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 184, 43

Conread position: 2-310
Cow position: chrX:3579885-3580185 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 30

Conread position: 2-310
Cow position: chrX:4153096-4152804 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 103

Conread position: 2-310
Cow position: chrX:5118563-5118258 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 184, 30

Conread position: 2-310
Cow position: chrX:7351240-7351541 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 173, 56

Conread position: 2-310
Cow position: chrX:13121869-13122184 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 48

Conread position: 2-310
Cow position: chrX:20584263-20584552 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 93

Conread position: 2-310
Cow position: chrX:22115377-22115074 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 184, 48

Conread position: 2-310
Cow position: chrX:29723681-29723991 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 58

Conread position: 2-310
Cow position: chrX:34532460-34532753 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 184, 21

Conread position: 2-310
Cow position: chrX:34554665-34554965 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 51

Conread position: 2-310
Cow position: chrX:35885788-35885491 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 184, 39

Conread position: 2-310
Cow position: chrX:41790506-41790187 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 70

Conread position: 2-310
Cow position: chrX:43050004-43050311 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 8

Conread position: 2-310
Cow position: chrX:45110595-45110891 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 184, 61

Conread position: 3-181
Cow position: chrX:26625735-26625562 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 7

Conread position: 3-190
Cow position: chrX:21004622-21004802 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 3-221
Cow position: chrX:878442-878228 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 186, 8

Conread position: 3-282
Cow position: chrX:34222654-34222926 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 164, 69

Conread position: 3-290
Cow position: chrX:34543723-34544006 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 7

Conread position: 3-293
Cow position: chrX:9651085-9650804 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 176, 29

Conread position: 3-295
Cow position: chrX:10516191-10516479 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 7

Conread position: 3-298
Cow position: chrX:45976862-45977152 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 101

Conread position: 3-301
Cow position: chrX:4399064-4399349 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 3-301
Cow position: chrX:27261129-27261421 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 7

Conread position: 3-302
Cow position: chrX:7178838-7179115 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 172, 35

Conread position: 3-302
Cow position: chrX:27511367-27511648 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 53

Conread position: 3-303
Cow position: chrX:11844309-11844003 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 111

Conread position: 3-303
Cow position: chrX:34565221-34565518 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 112

Conread position: 3-310
Cow position: chrX:31948998-31948692 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 61

Conread position: 4-219
Cow position: chrX:29289520-29289728 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 58

Conread position: 4-293
Cow position: chrX:29680319-29680024 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 171, 54

Conread position: 4-294
Cow position: chrX:15007208-15006935 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 54

Conread position: 4-294
Cow position: chrX:45598660-45598384 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 182, 53

Conread position: 4-303
Cow position: chrX:23563849-23563557 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 180, 45

Conread position: 4-303
Cow position: chrX:27442614-27442305 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 76, 54

Conread position: 4-303
Cow position: chrX:48010542-48010838 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 33

Conread position: 4-310
Cow position: chrX:46291079-46291381 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 35

Conread position: 5-285
Cow position: chrX:29544932-29544671 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 6

Conread position: 5-285
Cow position: chrX:34238657-34238938 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 54

Conread position: 6-269
Cow position: chrX:14275802-14275549 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 178, 5

Conread position: 6-275
Cow position: chrX:21064226-21064487 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 178, 8

Conread position: 6-286
Cow position: chrX:1360030-1360298 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 170, 5

Conread position: 6-286
Cow position: chrX:38208600-38208338 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 170, 39

Conread position: 6-294
Cow position: chrX:26881624-26881338 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 180, 5

Conread position: 6-296
Cow position: chrX:6559501-6559230 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 6-298
Cow position: chrX:296339-296620 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 5

Conread position: 6-298
Cow position: chrX:12290665-12290946 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 27

Conread position: 6-298
Cow position: chrX:24365881-24365594 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 5

Conread position: 6-298
Cow position: chrX:36866115-36866401 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 5

Conread position: 6-299
Cow position: chrX:8869460-8869175 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 170, 5

Conread position: 6-299
Cow position: chrX:44961693-44961984 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 5

Conread position: 6-300
Cow position: chrX:26492951-26493236 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 14

Conread position: 6-303
Cow position: chrX:30273-30564 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 5

Conread position: 6-303
Cow position: chrX:6407487-6407774 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 66

Conread position: 6-303
Cow position: chrX:27459800-27460101 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 107, 5

Conread position: 6-309
Cow position: chrX:44192506-44192201 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 142, 66

Conread position: 6-310
Cow position: chrX:11633624-11633924 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 169, 7

Conread position: 6-310
Cow position: chrX:22283776-22284079 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 5

Conread position: 7-221
Cow position: chrX:23091812-23092025 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 19

Conread position: 7-268
Cow position: chrX:169601-169343 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 54

Conread position: 7-286
Cow position: chrX:31436422-31436685 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 19

Conread position: 7-298
Cow position: chrX:40108572-40108285 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 172, 34

Conread position: 7-298
Cow position: chrX:44054751-44055031 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 169, 40

Conread position: 7-303
Cow position: chrX:13146925-13147217 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 42

Conread position: 8-298
Cow position: chrX:36392245-36391960 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 41

Conread position: 10-298
Cow position: chrX:34441504-34441225 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 166, 81

Conread position: 10-298
Cow position: chrX:42247239-42246953 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 10-303
Cow position: chrX:11825693-11825410 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 42

Conread position: 10-309
Cow position: chrX:44339377-44339080 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 10-310
Cow position: chrX:20887698-20887409 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 87

Conread position: 10-310
Cow position: chrX:30962926-30962633 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 176, 43

Conread position: 10-310
Cow position: chrX:35985765-35986055 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 179, 40

Conread position: 11-298
Cow position: chrX:9360836-9361110 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 200, 50

Conread position: 11-298
Cow position: chrX:16762717-16762996 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 160, 61

Conread position: 11-298
Cow position: chrX:34454613-34454887 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 38

Conread position: 11-298
Cow position: chrX:36356061-36356332 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 163, 43

Conread position: 11-303
Cow position: chrX:36975900-36976181 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 175, 11

Conread position: 11-303
Cow position: chrX:46546929-46546640 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 170, 61

Conread position: 11-310
Cow position: chrX:6541788-6541497 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 165, 49

Conread position: 12-298
Cow position: chrX:38935229-38935507 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 37

Conread position: 13-283
Cow position: chrX:23113226-23113505 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 111

Conread position: 13-310
Cow position: chrX:41871015-41871297 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 161, 45

Conread position: 14-294
Cow position: chrX:22393035-22392764 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 176, 44

Conread position: 16-310
Cow position: chrX:36367989-36367695 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 95, 55

Conread position: 17-289
Cow position: chrX:48646653-48646390 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 46

Conread position: 17-294
Cow position: chrX:38642202-38642466 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 42

Conread position: 18-264
Cow position: chrX:32605123-32604874 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 6, 0

Conread position: 19-295
Cow position: chrX:4645956-4645689 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 157, 39

Conread position: 19-298
Cow position: chrX:6599828-6599546 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 170, 40

Conread position: 25-298
Cow position: chrX:37489684-37489957 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 36

Conread position: 27-284
Cow position: chrX:48121235-48120992 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 144, 46

Conread position: 27-298
Cow position: chrX:28940210-28940472 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 27-298
Cow position: chrX:42492553-42492293 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 27

Conread position: 27-300
Cow position: chrX:34315480-34315757 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 159, 91

Conread position: 27-301
Cow position: chrX:48558711-48558978 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 42

Conread position: 27-310
Cow position: chrX:24331743-24332017 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 149, 23

Conread position: 27-310
Cow position: chrX:42893881-42894161 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 86

Conread position: 28-298
Cow position: chrX:17956660-17956917 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 146, 32

Conread position: 28-298
Cow position: chrX:43150385-43150659 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 99

Conread position: 31-220
Cow position: chrX:22915069-22914891 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 29

Conread position: 31-226
Cow position: chrX:20697639-20697454 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 18

Conread position: 31-227
Cow position: chrX:37129235-37129427 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 41

Conread position: 31-298
Cow position: chrX:31442863-31442611 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 154, 41

Conread position: 31-298
Cow position: chrX:41941594-41941851 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 40

Conread position: 31-299
Cow position: chrX:13913035-13913304 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 65

Conread position: 31-299
Cow position: chrX:34505083-34504824 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 42

Conread position: 31-303
Cow position: chrX:12979869-12979602 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 147, 87

Conread position: 31-303
Cow position: chrX:45488886-45489154 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 18

Conread position: 31-308
Cow position: chrX:35431276-35431003 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 27

Conread position: 31-310
Cow position: chrX:11326132-11325869 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 19

Conread position: 31-310
Cow position: chrX:19394520-19394797 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 148, 31

Conread position: 32-228
Cow position: chrX:23498709-23498521 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 28

Conread position: 32-272
Cow position: chrX:44660619-44660386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 13

Conread position: 32-279
Cow position: chrX:44954461-44954703 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 17

Conread position: 32-286
Cow position: chrX:30840508-30840757 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 142, 29

Conread position: 32-286
Cow position: chrX:44796351-44796600 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 140, 17

Conread position: 32-287
Cow position: chrX:47358276-47358531 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 152, 17

Conread position: 32-295
Cow position: chrX:48574615-48574872 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 17

Conread position: 32-298
Cow position: chrX:44202078-44201817 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 26

Conread position: 32-298
Cow position: chrX:44834683-44834426 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 17

Conread position: 32-298
Cow position: chrX:45447224-45447485 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 17

Conread position: 32-298
Cow position: chrX:46722621-46722361 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 152, 17

Conread position: 32-302
Cow position: chrX:47210876-47210604 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 18

Conread position: 32-303
Cow position: chrX:44090891-44091156 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:44238796-44238525 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:44591093-44590828 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:44837233-44837501 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:44859894-44859629 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:45254614-45254349 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:45391745-45391480 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:48198678-48198415 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 152, 17

Conread position: 32-303
Cow position: chrX:48397859-48397592 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 17

Conread position: 32-309
Cow position: chrX:48473876-48474146 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 17

Conread position: 32-310
Cow position: chrX:4512204-4512485 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 86

Conread position: 32-310
Cow position: chrX:47013434-47013161 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 21

Conread position: 32-310
Cow position: chrX:48532283-48532554 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 17

Conread position: 33-303
Cow position: chrX:1397596-1397862 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 17

Conread position: 33-303
Cow position: chrX:34540649-34540916 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 151, 17

Conread position: 33-303
Cow position: chrX:43152187-43151918 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 25

Conread position: 33-303
Cow position: chrX:48071131-48071395 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 16

Conread position: 33-310
Cow position: chrX:31729412-31729679 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 142, 17

Conread position: 34-298
Cow position: chrX:4289410-4289662 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 35-294
Cow position: chrX:48570872-48570619 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 149, 14

Conread position: 36-211
Cow position: chrX:20743575-20743746 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 36

Conread position: 37-303
Cow position: chrX:45403572-45403312 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 13

Conread position: 40-294
Cow position: chrX:1088166-1087924 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 68

Conread position: 40-294
Cow position: chrX:24749064-24749311 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 23

Conread position: 40-298
Cow position: chrX:43115126-43115377 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 149, 33

Conread position: 40-303
Cow position: chrX:19469529-19469280 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 21

Conread position: 42-298
Cow position: chrX:25411886-25412147 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 19

Conread position: 43-295
Cow position: chrX:9272491-9272232 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 77

Conread position: 45-301
Cow position: chrX:42836166-42836411 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 131, 13

Conread position: 45-310
Cow position: chrX:32574294-32574561 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 7, 69

Conread position: 46-284
Cow position: chrX:42282559-42282791 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 26

Conread position: 46-310
Cow position: chrX:42450033-42449771 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 26

Conread position: 47-304
Cow position: chrX:35275969-35276221 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 129, 16

Conread position: 48-298
Cow position: chrX:10252215-10251974 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 13

Conread position: 49-298
Cow position: chrX:45124386-45124628 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 135, 14

Conread position: 49-298
Cow position: chrX:47750168-47749926 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 14

Conread position: 50-275
Cow position: chrX:44736871-44736650 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 13

Conread position: 50-310
Cow position: chrX:43008593-43008852 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 136, 61

Conread position: 51-295
Cow position: chrX:16541670-16541431 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 22

Conread position: 52-303
Cow position: chrX:24170742-24170492 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 126, 11

Conread position: 53-271
Cow position: chrX:11859548-11859335 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 10

Conread position: 53-294
Cow position: chrX:11653750-11653991 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 166

Conread position: 53-298
Cow position: chrX:11763014-11762783 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 65

Conread position: 54-286
Cow position: chrX:28836881-28837100 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 60

Conread position: 54-296
Cow position: chrX:2935945-2936179 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 50

Conread position: 54-309
Cow position: chrX:30672411-30672145 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 18, 60

Conread position: 54-310
Cow position: chrX:17292943-17293195 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 130, 59

Conread position: 55-310
Cow position: chrX:20677355-20677602 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 63

Conread position: 56-303
Cow position: chrX:42479823-42480060 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 123, 48

Conread position: 57-298
Cow position: chrX:10859321-10859085 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 62

Conread position: 58-298
Cow position: chrX:1552962-1553198 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 5

Conread position: 58-300
Cow position: chrX:13923857-13924091 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 14

Conread position: 58-303
Cow position: chrX:40574950-40574710 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 55

Conread position: 60-303
Cow position: chrX:26979795-26979558 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 51

Conread position: 60-303
Cow position: chrX:45139938-45139698 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 58

Conread position: 60-310
Cow position: chrX:25207860-25207622 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 18

Conread position: 61-298
Cow position: chrX:38587849-38587617 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 53

Conread position: 61-298
Cow position: chrX:42432518-42432286 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 59, 12

Conread position: 61-301
Cow position: chrX:9425748-9425531 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 115, 52

Conread position: 61-301
Cow position: chrX:16836292-16836063 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 9, 34

Conread position: 61-303
Cow position: chrX:32330162-32330405 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 66

Conread position: 61-310
Cow position: chrX:22864280-22864021 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 56

Conread position: 61-310
Cow position: chrX:26205453-26205218 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 115, 52

Conread position: 61-310
Cow position: chrX:35658796-35659033 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 119, 7

Conread position: 62-299
Cow position: chrX:39290355-39290584 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 56

Conread position: 62-301
Cow position: chrX:28846897-28846662 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 42

Conread position: 63-290
Cow position: chrX:36922157-36921921 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 192

Conread position: 63-294
Cow position: chrX:27075053-27074827 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 9

Conread position: 63-294
Cow position: chrX:35383037-35382818 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 18

Conread position: 63-295
Cow position: chrX:15485638-15485408 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 50

Conread position: 63-295
Cow position: chrX:29478722-29478947 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 113, 9

Conread position: 63-295
Cow position: chrX:46022770-46023000 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 59

Conread position: 63-297
Cow position: chrX:28632490-28632255 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 50

Conread position: 63-297
Cow position: chrX:32910102-32910324 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 10

Conread position: 63-298
Cow position: chrX:3806677-3806907 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 52

Conread position: 63-298
Cow position: chrX:8493063-8493294 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 50

Conread position: 63-298
Cow position: chrX:25846076-25845845 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 50

Conread position: 63-298
Cow position: chrX:27431921-27431696 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 45

Conread position: 63-299
Cow position: chrX:48118456-48118222 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 56

Conread position: 63-300
Cow position: chrX:23335974-23335745 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 113, 9

Conread position: 63-301
Cow position: chrX:5063249-5063467 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 63-303
Cow position: chrX:13177482-13177251 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 35

Conread position: 63-303
Cow position: chrX:16984639-16984868 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 9

Conread position: 63-303
Cow position: chrX:18111375-18111612 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 121, 50

Conread position: 63-303
Cow position: chrX:43321056-43320821 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 46

Conread position: 63-310
Cow position: chrX:4269069-4268830 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 61

Conread position: 63-310
Cow position: chrX:15231663-15231419 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 55

Conread position: 63-310
Cow position: chrX:27145601-27145842 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 50

Conread position: 63-310
Cow position: chrX:42331276-42331515 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 116, 9

Conread position: 63-310
Cow position: chrX:48194894-48194650 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 56

Conread position: 64-239
Cow position: chrX:16575110-16575282 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 51

Conread position: 64-243
Cow position: chrX:33204970-33204795 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 9

Conread position: 64-278
Cow position: chrX:46770964-46770754 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 8

Conread position: 64-298
Cow position: chrX:38218713-38218941 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 114, 8

Conread position: 64-303
Cow position: chrX:36109618-36109381 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 47

Conread position: 64-310
Cow position: chrX:34420733-34420976 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 112, 8

Conread position: 65-298
Cow position: chrX:11656079-11656306 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 44

Conread position: 65-298
Cow position: chrX:26843270-26843038 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 55

Conread position: 65-298
Cow position: chrX:40336909-40337139 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 48

Conread position: 65-298
Cow position: chrX:47279938-47279708 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 170, 84

Conread position: 65-299
Cow position: chrX:32420213-32420439 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 110, 40

Conread position: 65-303
Cow position: chrX:27446685-27446916 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 113, 48

Conread position: 65-303
Cow position: chrX:33654845-33654610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 111, 48

Conread position: 65-310
Cow position: chrX:4632860-4632614 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 56

Conread position: 65-310
Cow position: chrX:7648412-7648172 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 5, 56

Conread position: 66-292
Cow position: chrX:15147193-15146977 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 52

Conread position: 66-309
Cow position: chrX:39180233-39179989 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 54

Conread position: 67-303
Cow position: chrX:38967889-38968128 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 47

Conread position: 67-310
Cow position: chrX:19018830-19018588 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 46

Conread position: 68-302
Cow position: chrX:18204465-18204234 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 50

Conread position: 68-303
Cow position: chrX:25049280-25049048 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 116, 44

Conread position: 69-294
Cow position: chrX:1175979-1175766 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 69-298
Cow position: chrX:4403314-4403546 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 69-298
Cow position: chrX:46032724-46032500 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 49

Conread position: 69-301
Cow position: chrX:4328180-4327949 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 107, 44

Conread position: 69-301
Cow position: chrX:36283341-36283571 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 107, 39

Conread position: 69-302
Cow position: chrX:37955850-37956077 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 52

Conread position: 69-303
Cow position: chrX:17524381-17524150 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 109, 42

Conread position: 69-303
Cow position: chrX:24336074-24335843 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 51

Conread position: 69-309
Cow position: chrX:18485800-18486042 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 132

Conread position: 69-310
Cow position: chrX:19203357-19203105 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 69-310
Cow position: chrX:41674107-41674339 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 48

Conread position: 70-294
Cow position: chrX:37856356-37856585 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 70-300
Cow position: chrX:8917398-8917625 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 50

Conread position: 70-301
Cow position: chrX:29733588-29733360 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 42

Conread position: 71-294
Cow position: chrX:1122538-1122323 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 114, 40

Conread position: 72-294
Cow position: chrX:27447705-27447941 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 72-294
Cow position: chrX:38301815-38302038 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 52

Conread position: 72-303
Cow position: chrX:19717527-19717744 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 104, 48

Conread position: 73-279
Cow position: chrX:22822053-22822264 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 45

Conread position: 74-298
Cow position: chrX:16324006-16323787 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 39

Conread position: 74-298
Cow position: chrX:35285181-35285402 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 102, 39

Conread position: 75-296
Cow position: chrX:10829441-10829661 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 45

Conread position: 78-298
Cow position: chrX:27668946-27668734 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 25

Conread position: 78-310
Cow position: chrX:35392282-35392065 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 98, 33

Conread position: 79-285
Cow position: chrX:30824000-30824200 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 14

Conread position: 79-287
Cow position: chrX:30922184-30922389 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 34

Conread position: 79-295
Cow position: chrX:3494809-3494596 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 34

Conread position: 79-299
Cow position: chrX:20957251-20957466 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 107, 30

Conread position: 79-303
Cow position: chrX:15545895-15546114 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 41

Conread position: 81-298
Cow position: chrX:907961-908169 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 32

Conread position: 82-298
Cow position: chrX:19356485-19356692 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 92, 29

Conread position: 82-301
Cow position: chrX:31479987-31480197 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 26

Conread position: 83-295
Cow position: chrX:19761771-19761974 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 30

Conread position: 83-303
Cow position: chrX:20345470-20345684 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 25

Conread position: 85-286
Cow position: chrX:41810149-41809959 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 28

Conread position: 86-301
Cow position: chrX:5134487-5134705 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 6, 21

Conread position: 86-303
Cow position: chrX:28067870-28068084 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 89, 27

Conread position: 86-310
Cow position: chrX:24425982-24425762 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 34

Conread position: 88-303
Cow position: chrX:34398762-34398550 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 30

Conread position: 90-297
Cow position: chrX:755944-756147 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 16

Conread position: 90-298
Cow position: chrX:16763903-16763702 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 30

Conread position: 91-301
Cow position: chrX:1938035-1938244 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 31

Conread position: 93-287
Cow position: chrX:44995525-44995717 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 20

Conread position: 94-299
Cow position: chrX:4602916-4602709 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 59

Conread position: 94-310
Cow position: chrX:16412260-16412041 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 95-298
Cow position: chrX:5097776-5097566 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 189

Conread position: 95-310
Cow position: chrX:32866898-32867110 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 11

Conread position: 98-303
Cow position: chrX:1960397-1960192 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 10

Conread position: 101-310
Cow position: chrX:10278899-10279114 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 19

Conread position: 102-298
Cow position: chrX:6389113-6389307 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 21

Conread position: 105-303
Cow position: chrX:41435516-41435309 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 8

Conread position: 108-298
Cow position: chrX:6480561-6480367 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 108-303
Cow position: chrX:8759662-8759856 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 5

Conread position: 109-294
Cow position: chrX:34270598-34270785 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 134

Conread position: 109-303
Cow position: chrX:44040212-44040410 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 110-295
Cow position: chrX:13347310-13347494 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 62

Conread position: 110-298
Cow position: chrX:32877337-32877151 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 108

Conread position: 113-297
Cow position: chrX:41166784-41166602 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 84

Conread position: 113-310
Cow position: chrX:29451510-29451304 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 115-279
Cow position: chrX:19795461-19795300 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 66

Conread position: 115-291
Cow position: chrX:31986531-31986351 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 95

Conread position: 115-293
Cow position: chrX:35681610-35681790 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 99

Conread position: 115-293
Cow position: chrX:45759714-45759892 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 103

Conread position: 115-296
Cow position: chrX:41858839-41858658 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 105

Conread position: 115-298
Cow position: chrX:2314576-2314390 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 115-298
Cow position: chrX:20583709-20583888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 111

Conread position: 115-298
Cow position: chrX:23471823-23471640 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 112

Conread position: 115-298
Cow position: chrX:25930680-25930868 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 152

Conread position: 115-298
Cow position: chrX:27270418-27270597 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 112

Conread position: 115-298
Cow position: chrX:27415537-27415359 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 104

Conread position: 115-298
Cow position: chrX:27416136-27416323 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 35

Conread position: 115-298
Cow position: chrX:46068716-46068536 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 101

Conread position: 115-298
Cow position: chrX:48822299-48822114 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 120

Conread position: 115-299
Cow position: chrX:16556174-16555994 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 102

Conread position: 115-299
Cow position: chrX:31983542-31983349 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 115-301
Cow position: chrX:4091967-4092153 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 155

Conread position: 115-301
Cow position: chrX:8642089-8642276 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 46

Conread position: 115-303
Cow position: chrX:3605923-3606114 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 115-303
Cow position: chrX:7911029-7910840 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 171

Conread position: 115-303
Cow position: chrX:11454229-11454408 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 182, 50

Conread position: 115-303
Cow position: chrX:11781296-11781479 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 63

Conread position: 115-303
Cow position: chrX:17498365-17498556 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 115-303
Cow position: chrX:31250852-31250661 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 115-303
Cow position: chrX:35409795-35409985 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 115-303
Cow position: chrX:37752063-37751878 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 98

Conread position: 115-303
Cow position: chrX:45843551-45843359 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 67

Conread position: 115-303
Cow position: chrX:46909858-46910041 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 112

Conread position: 115-303
Cow position: chrX:48495040-48495231 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 17

Conread position: 115-306
Cow position: chrX:47601281-47601087 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 115-307
Cow position: chrX:42760295-42760490 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 115-309
Cow position: chrX:37749940-37749755 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 23

Conread position: 115-310
Cow position: chrX:11517937-11517739 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 194

Conread position: 115-310
Cow position: chrX:14951310-14951113 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 106

Conread position: 115-310
Cow position: chrX:23359068-23358877 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 19

Conread position: 115-310
Cow position: chrX:32020091-32019894 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 193

Conread position: 115-310
Cow position: chrX:41454911-41454713 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 116-298
Cow position: chrX:6634388-6634573 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 116-298
Cow position: chrX:41453346-41453527 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 118

Conread position: 116-299
Cow position: chrX:41991090-41990894 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 116-299
Cow position: chrX:42875256-42875438 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 102

Conread position: 116-301
Cow position: chrX:28850771-28850948 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 16

Conread position: 116-301
Cow position: chrX:44225687-44225499 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 116-303
Cow position: chrX:597430-597245 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 116-303
Cow position: chrX:18030373-18030183 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 117-298
Cow position: chrX:40648939-40649130 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 117-301
Cow position: chrX:876797-876616 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 32

Conread position: 117-310
Cow position: chrX:5026301-5026491 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 99

Conread position: 118-301
Cow position: chrX:10415207-10415021 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 118-303
Cow position: chrX:42461572-42461394 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 119-294
Cow position: chrX:8326951-8327129 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 119-310
Cow position: chrX:44123302-44123491 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 108

Conread position: 120-294
Cow position: chrX:42539607-42539771 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 60

Conread position: 121-303
Cow position: chrX:42506901-42506713 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 5, 20

Conread position: 121-310
Cow position: chrX:41010947-41011129 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 93

Conread position: 122-297
Cow position: chrX:11602431-11602260 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 9

Conread position: 123-297
Cow position: chrX:34991415-34991588 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 59, 110

Conread position: 123-310
Cow position: chrX:1101608-1101791 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 81

Conread position: 124-286
Cow position: chrX:11813128-11813290 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 17

Conread position: 124-291
Cow position: chrX:46533253-46533083 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 124-303
Cow position: chrX:1121315-1121133 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 124-303
Cow position: chrX:4169979-4169795 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 77

Conread position: 124-303
Cow position: chrX:37867305-37867487 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 124-310
Cow position: chrX:47100545-47100354 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 84

Conread position: 125-303
Cow position: chrX:11781504-11781677 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 101

Conread position: 126-298
Cow position: chrX:5915242-5915419 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 126-298
Cow position: chrX:17550606-17550436 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 127-294
Cow position: chrX:3494991-3494826 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 35

Conread position: 129-295
Cow position: chrX:37867489-37867658 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 129-303
Cow position: chrX:51844-51669 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 79

Conread position: 133-303
Cow position: chrX:46893162-46893333 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 16

Conread position: 134-298
Cow position: chrX:9451407-9451569 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 107

Conread position: 134-310
Cow position: chrX:45044514-45044694 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 136-279
Cow position: chrX:41765528-41765665 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 136-286
Cow position: chrX:10237849-10237697 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 71

Conread position: 136-293
Cow position: chrX:15100047-15100201 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 83

Conread position: 136-294
Cow position: chrX:27202634-27202793 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 96

Conread position: 136-297
Cow position: chrX:23497627-23497470 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 81

Conread position: 136-298
Cow position: chrX:4559797-4559962 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 136-298
Cow position: chrX:14925336-14925501 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 136-301
Cow position: chrX:22552915-22552748 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 135

Conread position: 136-301
Cow position: chrX:41199288-41199453 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 94

Conread position: 136-303
Cow position: chrX:11589303-11589133 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 104

Conread position: 136-303
Cow position: chrX:32215292-32215462 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 136-310
Cow position: chrX:26882016-26881839 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 137-298
Cow position: chrX:14135743-14135903 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 90

Conread position: 137-303
Cow position: chrX:6267727-6267903 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 138-296
Cow position: chrX:48574291-48574128 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 138-301
Cow position: chrX:34194015-34193849 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 138-310
Cow position: chrX:16801197-16801027 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 139-298
Cow position: chrX:25827068-25826911 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 139-298
Cow position: chrX:41215389-41215551 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 139-303
Cow position: chrX:19000193-19000360 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 139-310
Cow position: chrX:16770131-16770304 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 169

Conread position: 141-294
Cow position: chrX:28167048-28167203 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 78

Conread position: 141-301
Cow position: chrX:28106916-28107077 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 92

Conread position: 141-310
Cow position: chrX:11674178-11674352 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 142-286
Cow position: chrX:39094252-39094117 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 142-301
Cow position: chrX:33678403-33678239 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 142-310
Cow position: chrX:30789461-30789289 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 143-303
Cow position: chrX:35509608-35509447 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 75

Conread position: 146-304
Cow position: chrX:34108284-34108124 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 110

Conread position: 146-309
Cow position: chrX:37717796-37717960 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 16

Conread position: 148-302
Cow position: chrX:26720606-26720458 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 79

Conread position: 149-301
Cow position: chrX:3542933-3543096 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 152-310
Cow position: chrX:37844075-37844240 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 145

Conread position: 153-301
Cow position: chrX:17929082-17929229 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 69

Conread position: 156-303
Cow position: chrX:1996368-1996218 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 159-299
Cow position: chrX:31279837-31279698 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 67

Conread position: 159-303
Cow position: chrX:42314805-42314656 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 160-281
Cow position: chrX:25049014-25048891 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 80

Conread position: 160-303
Cow position: chrX:11670774-11670920 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 160-303
Cow position: chrX:27226570-27226716 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 161-300
Cow position: chrX:30958819-30958958 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 109

Conread position: 161-310
Cow position: chrX:39887125-39886972 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 172-302
Cow position: chrX:26367600-26367469 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 174-285
Cow position: chrX:13135445-13135338 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 174-287
Cow position: chrX:40583209-40583096 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 174-294
Cow position: chrX:10479854-10479974 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-298
Cow position: chrX:41194010-41194133 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 13

Conread position: 174-303
Cow position: chrX:42516025-42515896 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-310
Cow position: chrX:36962855-36962990 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 174-310
Cow position: chrX:42165509-42165380 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 175-301
Cow position: chrX:42159047-42159173 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 175-310
Cow position: chrX:6855965-6856100 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 179-301
Cow position: chrX:16532617-16532741 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 5

Conread position: 183-310
Cow position: chrX:783558-783687 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 184-298
Cow position: chrX:19162016-19161902 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 184-301
Cow position: chrX:36039139-36039257 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 185-297
Cow position: chrX:42220586-42220474 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 185-301
Cow position: chrX:23185222-23185106 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 185-303
Cow position: chrX:38080263-38080381 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 187-301
Cow position: chrX:18196116-18196231 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 187-310
Cow position: chrX:32590288-32590165 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 190-303
Cow position: chrX:23882899-23883011 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 192-301
Cow position: chrX:42216508-42216402 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 197-310
Cow position: chrX:7950583-7950471 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 205-310
Cow position: chrX:3130778-3130884 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 216-303
Cow position: chrX:15545505-15545418 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.