Cow genome map

Conread name: rfbs3940b_b12.y1

Conread position: 1-331
Cow position: chr14:25859728-25860058 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 210
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 86

Conread position: 4-241
Cow position: chr14:25794383-25794147 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 220

Conread position: 4-381
Cow position: chr14:25783975-25784352 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 4-381
Cow position: chr14:25876362-25876739 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 77

Conread position: 8-295
Cow position: chr14:3156197-3156484 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 103

Conread position: 8-305
Cow position: chr14:3155540-3155837 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 8-330
Cow position: chr14:25859651-25859973 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 158, 183

Conread position: 8-336
Cow position: chr14:3061444-3061114 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 172

Conread position: 8-336
Cow position: chr14:3080043-3079715 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 8-336
Cow position: chr14:25794883-25794555 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 8-381
Cow position: chr14:3080295-3079922 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 240
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 101, 96

Conread position: 8-381
Cow position: chr14:25859315-25859688 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 236
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 139

Conread position: 9-337
Cow position: chr14:680691-681019 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 9-338
Cow position: chr14:25784400-25784729 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 155, 170

Conread position: 9-378
Cow position: chr14:3156114-3156483 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 352, 333

Conread position: 9-381
Cow position: chr14:25783644-25784016 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 9-381
Cow position: chr14:25783728-25784100 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 9-381
Cow position: chr14:25784064-25784436 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 95

Conread position: 10-381
Cow position: chr14:3127889-3127518 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 323, 344

Conread position: 11-338
Cow position: chr14:25795132-25794805 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 90

Conread position: 16-297
Cow position: chr14:25896093-25896374 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 179
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 77

Conread position: 16-381
Cow position: chr14:25783567-25783932 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 228
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 16-381
Cow position: chr14:25876626-25876991 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 173, 154

Conread position: 17-330
Cow position: chr14:3127630-3127317 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 76

Conread position: 17-330
Cow position: chr14:3155465-3155778 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 17-375
Cow position: chr14:25783820-25784178 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-375
Cow position: chr14:25795462-25795104 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 197, 208

Conread position: 17-381
Cow position: chr14:3080958-3080594 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 60

Conread position: 17-381
Cow position: chr14:25795210-25794846 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 326, 344

Conread position: 17-381
Cow position: chr14:25836439-25836803 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 223
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 331, 323

Conread position: 17-381
Cow position: chr14:25859576-25859940 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 224
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 76

Conread position: 22-325
Cow position: chr14:25794449-25794147 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 111, 286

Conread position: 22-335
Cow position: chr14:3100692-3100378 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 85

Conread position: 22-381
Cow position: chr14:25896015-25896374 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 69

Conread position: 25-330
Cow position: chr14:25876803-25877108 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 63

Conread position: 25-331
Cow position: chr14:25836531-25836837 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 63

Conread position: 25-377
Cow position: chr14:25860004-25860356 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 224
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 66

Conread position: 25-381
Cow position: chr14:25836195-25836551 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 251, 247

Conread position: 25-381
Cow position: chr14:25859248-25859604 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 218
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 193, 206

Conread position: 26-270
Cow position: chr14:25859837-25860081 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 167, 146

Conread position: 26-300
Cow position: chr14:3079941-3079667 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 26-324
Cow position: chr14:3127705-3127407 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 138, 145

Conread position: 26-330
Cow position: chr14:680288-680592 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 69

Conread position: 26-330
Cow position: chr14:3128125-3127821 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 78

Conread position: 26-330
Cow position: chr14:3156047-3156351 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 26-330
Cow position: chr14:25895851-25896155 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 188
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 26-331
Cow position: chr14:680876-681181 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 67

Conread position: 26-331
Cow position: chr14:25836616-25836921 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 26-335
Cow position: chr14:3101438-3101129 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 61

Conread position: 26-336
Cow position: chr14:447570-447880 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 85, 78

Conread position: 26-336
Cow position: chr14:3127957-3127647 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 26-336
Cow position: chr14:25877140-25877451 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 306, 0

Conread position: 26-340
Cow position: chr14:680960-681274 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 192
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 26-340
Cow position: chr14:25895095-25895409 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 193
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 26-371
Cow position: chr14:25836112-25836457 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 306, 317

Conread position: 26-373
Cow position: chr14:25784333-25784680 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 321, 333

Conread position: 26-375
Cow position: chr14:25783325-25783674 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 26-375
Cow position: chr14:25836868-25837217 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 215
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 69

Conread position: 26-377
Cow position: chr14:25794529-25794177 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 179, 144

Conread position: 26-381
Cow position: chr14:447654-448009 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 78

Conread position: 26-381
Cow position: chr14:447738-448093 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 83

Conread position: 26-381
Cow position: chr14:447822-448177 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 78

Conread position: 26-381
Cow position: chr14:680456-680811 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 80

Conread position: 26-381
Cow position: chr14:680792-681147 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 78, 83

Conread position: 26-381
Cow position: chr14:3080445-3080090 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 306, 328

Conread position: 26-381
Cow position: chr14:3080529-3080174 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 223
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr14:3080697-3080342 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 78

Conread position: 26-381
Cow position: chr14:25783493-25783848 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr14:25783913-25784268 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr14:25784249-25784604 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr14:25794697-25794342 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 63, 70

Conread position: 26-381
Cow position: chr14:25795033-25794678 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 216
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 252, 246

Conread position: 26-381
Cow position: chr14:25836784-25837139 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 169

Conread position: 26-381
Cow position: chr14:25860341-25860696 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 307, 330

Conread position: 26-381
Cow position: chr14:25877392-25877747 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 307, 320

Conread position: 27-377
Cow position: chr14:3100771-3100421 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 74

Conread position: 28-375
Cow position: chr14:3155881-3156228 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 161

Conread position: 30-377
Cow position: chr14:25794945-25794598 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 309, 315

Conread position: 32-381
Cow position: chr14:25860263-25860612 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 222
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 52

Conread position: 36-381
Cow position: chr14:25895693-25896038 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 230, 242

Conread position: 38-381
Cow position: chr14:3100844-3100501 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 206
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 189, 193

Conread position: 38-381
Cow position: chr14:3155975-3156318 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 42-330
Cow position: chr14:3155406-3155694 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 65

Conread position: 44-339
Cow position: chr14:3061742-3061447 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 110-378
Cow position: chr14:3101438-3101171 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 61

Conread position: 110-381
Cow position: chr14:447570-447841 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 163

Conread position: 110-381
Cow position: chr14:25783325-25783596 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 251, 246

Conread position: 128-381
Cow position: chr14:3155408-3155661 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 205, 226

Show alignments to all cow chromosomes.