Cow genome map


           Conread name:
           rfbs3940b_b12.y1
        

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               172, 192
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               361, 24
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               197, 42
               

               Conread position:
               6-381
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               170, 179
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               271, 265
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 104
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               250, 264
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               169, 177
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               150, 159
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 86
               

               Conread position:
               9-377
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-301
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 85
               

               Conread position:
               10-324
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               268, 262
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               10-381
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               10-381
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-337
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               162, 180
               

               Conread position:
               15-338
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               15-381
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               348, 341
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               168, 156
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 89
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               160, 178
               

               Conread position:
               17-338
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               81, 93
               

               Conread position:
               17-378
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-379
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               280, 119
               

               Conread position:
               17-381
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               167, 152
               

               Conread position:
               22-381
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               25-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               25-378
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               338, 331
               

               Conread position:
               25-381
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               26-330
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               152, 159
               

               Conread position:
               26-331
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               74, 85
               

               Conread position:
               26-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               171, 179
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               65, 69
               

               Conread position:
               26-337
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               146, 164
               

               Conread position:
               26-338
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 160
               

               Conread position:
               26-338
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-338
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               26-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               26-340
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               146, 159
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               276, 66
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               155, 159
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               152, 103
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               332, 324
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 204
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               149, 39
               

               Conread position:
               31-305
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 74
               

               Conread position:
               31-337
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 74
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               72, 79
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               32-381
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 324
               

               Conread position:
               32-381
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               336, 321
               

               Conread position:
               37-376
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               37-377
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               38-336
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               38-375
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-381
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               141, 127
               

               Conread position:
               46-381
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               46-381
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               102, 126
               

               Conread position:
               110-381
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               115-339
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.