Cow genome map
| Conread name: | rfbs3940b_b12.y1 |
| Conread position: | 8-223 |
| Cow position: | chr2:82800244-82800458 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 96 |
| Conread position: | 8-381 |
| Cow position: | chr2:82799656-82800029 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 338, 332 |
| Conread position: | 8-381 |
| Cow position: | chr2:82799824-82800197 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 10-381 |
| Cow position: | chr2:82799490-82799861 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-381 |
| Cow position: | chr2:82799994-82800365 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 14-336 |
| Cow position: | chr2:78755634-78755958 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 16-327 |
| Cow position: | chr2:82799580-82799891 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-332 |
| Cow position: | chr2:78754400-78754713 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 17-378 |
| Cow position: | chr2:82800084-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 8, 262 |
| Conread position: | 19-338 |
| Cow position: | chr2:78755558-78755876 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 19-381 |
| Cow position: | chr2:78754888-78755251 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 19-381 |
| Cow position: | chr2:78754972-78755335 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 20-381 |
| Cow position: | chr2:78755059-78755418 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 179, 7 |
| Conread position: | 26-296 |
| Cow position: | chr2:82800178-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-331 |
| Cow position: | chr2:5874614-5874308 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 26-335 |
| Cow position: | chr2:86465078-86465387 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 183, 193 |
| Conread position: | 26-336 |
| Cow position: | chr2:48689477-48689168 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 26-338 |
| Cow position: | chr2:78754812-78755124 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 26-380 |
| Cow position: | chr2:78755984-78756337 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 26-381 |
| Cow position: | chr2:78755232-78755585 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 138, 105 |
| Conread position: | 26-381 |
| Cow position: | chr2:78755483-78755835 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 28-336 |
| Cow position: | chr2:78755734-78756043 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 28-381 |
| Cow position: | chr2:78755401-78755751 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 31-336 |
| Cow position: | chr2:86465167-86465472 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 86 |
| Conread position: | 31-337 |
| Cow position: | chr2:86465335-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 35-381 |
| Cow position: | chr2:82799935-82800281 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 69 |
| Conread position: | 38-327 |
| Cow position: | chr2:5874686-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 38-381 |
| Cow position: | chr2:82799770-82800113 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 47-381 |
| Cow position: | chr2:48689540-48689207 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 144, 127 |
| Conread position: | 57-337 |
| Cow position: | chr2:82799453-82799733 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-381 |
| Cow position: | chr2:82799417-82799693 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 195-381 |
| Cow position: | chr2:78754814-78754999 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 168, 11 |
Show alignments to all cow chromosomes.