Cow genome map

Conread name: rfbs3940b_b12.y1

Conread position: 1-336
Cow position: chr22:12431785-12431450 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-378
Cow position: chr22:11641065-11641442 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-381
Cow position: chr22:12431281-12430901 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 88

Conread position: 7-381
Cow position: chr22:11640987-11641361 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 14

Conread position: 7-381
Cow position: chr22:12399799-12399425 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 100

Conread position: 7-381
Cow position: chr22:12458479-12458105 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 13

Conread position: 8-369
Cow position: chr22:12418981-12418620 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 271, 264

Conread position: 8-381
Cow position: chr22:12399294-12398921 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-381
Cow position: chr22:12458310-12457937 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 166, 176

Conread position: 9-336
Cow position: chr22:14468190-14468517 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 9-338
Cow position: chr22:46654060-46654389 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 205
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 71, 102

Conread position: 10-380
Cow position: chr22:12432196-12431826 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 12

Conread position: 10-381
Cow position: chr22:12475753-12475382 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 79

Conread position: 10-381
Cow position: chr22:12499506-12499877 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 11-381
Cow position: chr22:11640655-11641025 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 32

Conread position: 14-381
Cow position: chr22:12458639-12458273 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 13

Conread position: 15-300
Cow position: chr22:12458051-12457766 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 15-331
Cow position: chr22:12385361-12385045 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 92

Conread position: 15-336
Cow position: chr22:14430203-14430524 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 78

Conread position: 16-305
Cow position: chr22:12475579-12475290 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 88, 95

Conread position: 16-340
Cow position: chr22:12432274-12431950 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 66, 79

Conread position: 16-375
Cow position: chr22:12385276-12384917 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 16-381
Cow position: chr22:11640828-11641193 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 344, 334

Conread position: 17-336
Cow position: chr22:12458217-12457898 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 83, 92

Conread position: 17-338
Cow position: chr22:12385529-12385206 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 170

Conread position: 17-338
Cow position: chr22:12431013-12430692 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 94

Conread position: 17-381
Cow position: chr22:12399705-12399341 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position: chr22:12475914-12475550 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 346, 339

Conread position: 17-381
Cow position: chr22:12499345-12499709 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 90

Conread position: 19-305
Cow position: chr22:12499682-12499969 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 8, 93

Conread position: 19-381
Cow position: chr22:12476249-12475886 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 24-381
Cow position: chr22:12399530-12399173 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 160

Conread position: 24-381
Cow position: chr22:12432434-12432077 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 87, 82

Conread position: 25-336
Cow position: chr22:14429877-14430188 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 185, 147

Conread position: 26-300
Cow position: chr22:11701417-11701691 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 152

Conread position: 26-301
Cow position: chr22:12385182-12384907 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 26-301
Cow position: chr22:12399024-12398749 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 81

Conread position: 26-306
Cow position: chr22:11666679-11666959 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 162, 152

Conread position: 26-316
Cow position: chr22:12418795-12418505 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 26-327
Cow position: chr22:12476325-12476024 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 78

Conread position: 26-327
Cow position: chr22:12498934-12499235 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 85, 78

Conread position: 26-331
Cow position: chr22:12430920-12430615 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 79

Conread position: 26-336
Cow position: chr22:12418879-12418569 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 78

Conread position: 26-336
Cow position: chr22:12431844-12431533 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 307, 0

Conread position: 26-341
Cow position: chr22:12458376-12458061 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 254, 229

Conread position: 26-341
Cow position: chr22:14467955-14468270 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 67

Conread position: 26-368
Cow position: chr22:11666595-11666937 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 213
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 250, 239

Conread position: 26-369
Cow position: chr22:12432096-12431753 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 63

Conread position: 26-370
Cow position: chr22:12458124-12457780 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 158

Conread position: 26-375
Cow position: chr22:12476409-12476060 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-376
Cow position: chr22:11701333-11701683 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 74

Conread position: 26-377
Cow position: chr22:12399108-12398757 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 81

Conread position: 26-377
Cow position: chr22:12431340-12430989 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 26-377
Cow position: chr22:12431592-12431241 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 64

Conread position: 26-377
Cow position: chr22:12432012-12431661 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 192, 201

Conread position: 26-378
Cow position: chr22:12499606-12499958 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 26-381
Cow position: chr22:11640754-11641109 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 252, 245

Conread position: 26-381
Cow position: chr22:11640922-11641277 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 79

Conread position: 26-381
Cow position: chr22:11666511-11666866 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 70

Conread position: 26-381
Cow position: chr22:11701249-11701604 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 222
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 169, 156

Conread position: 26-381
Cow position: chr22:12385436-12385079 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 69

Conread position: 26-381
Cow position: chr22:12385688-12385331 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 18

Conread position: 26-381
Cow position: chr22:12399192-12398837 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 159

Conread position: 26-381
Cow position: chr22:12399360-12399005 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 26-381
Cow position: chr22:12399444-12399089 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 159

Conread position: 26-381
Cow position: chr22:12399612-12399257 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 166, 145

Conread position: 26-381
Cow position: chr22:12431088-12430733 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 148, 158

Conread position: 26-381
Cow position: chr22:12431424-12431069 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 148, 158

Conread position: 26-381
Cow position: chr22:12431928-12431573 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 174, 140

Conread position: 26-381
Cow position: chr22:12458544-12458189 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 26-381
Cow position: chr22:12475653-12475298 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 314

Conread position: 26-381
Cow position: chr22:12475821-12475466 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 161

Conread position: 26-381
Cow position: chr22:12475989-12475634 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 163

Conread position: 26-381
Cow position: chr22:12476073-12475718 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 144, 158

Conread position: 26-381
Cow position: chr22:12476157-12475802 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 150, 159

Conread position: 26-381
Cow position: chr22:12498850-12499205 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr22:12499102-12499457 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 135, 157

Conread position: 26-381
Cow position: chr22:12499270-12499625 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 146, 158

Conread position: 26-381
Cow position: chr22:12499438-12499793 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 161

Conread position: 27-338
Cow position: chr22:14429797-14430106 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 186, 6

Conread position: 27-381
Cow position: chr22:11666428-11666782 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 212
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 27-381
Cow position: chr22:46654498-46654853 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 60

Conread position: 30-379
Cow position: chr22:12431504-12431155 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 74

Conread position: 31-333
Cow position: chr22:14468044-14468346 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 33-348
Cow position: chr22:14468130-14468445 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 152

Conread position: 36-375
Cow position: chr22:46654255-46654594 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 75

Conread position: 40-341
Cow position: chr22:14429640-14429941 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 48-381
Cow position: chr22:12399920-12399593 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 53-381
Cow position: chr22:12399837-12399509 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 120

Conread position: 55-381
Cow position: chr22:11640615-11640941 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 72

Conread position: 56-375
Cow position: chr22:12419017-12418698 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 292, 284

Show alignments to all cow chromosomes.