Cow genome map


           Conread name:
           rfbs3940b_b12.y1
        

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 88
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 100
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               8-369
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               271, 264
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               166, 176
               

               Conread position:
               9-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-338
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               71, 102
               

               Conread position:
               10-380
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               10-381
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 79
               

               Conread position:
               10-381
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               14-381
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               15-300
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-331
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 92
               

               Conread position:
               15-336
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               87, 78
               

               Conread position:
               16-305
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               88, 95
               

               Conread position:
               16-340
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               16-375
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               344, 334
               

               Conread position:
               17-336
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               83, 92
               

               Conread position:
               17-338
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               111, 170
               

               Conread position:
               17-338
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               17-381
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-381
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               346, 339
               

               Conread position:
               17-381
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               78, 90
               

               Conread position:
               19-305
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               19-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               24-381
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 160
               

               Conread position:
               24-381
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               87, 82
               

               Conread position:
               25-336
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               185, 147
               

               Conread position:
               26-300
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               162, 152
               

               Conread position:
               26-301
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-301
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               26-306
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               162, 152
               

               Conread position:
               26-316
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-327
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               26-327
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               26-331
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               26-341
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               254, 229
               

               Conread position:
               26-341
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               26-368
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               250, 239
               

               Conread position:
               26-369
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               26-370
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               148, 158
               

               Conread position:
               26-375
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-376
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               26-377
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               26-377
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-377
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               26-377
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               192, 201
               

               Conread position:
               26-378
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               252, 245
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 70
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               169, 156
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 159
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 159
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               166, 145
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               148, 158
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               148, 158
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               174, 140
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 314
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 161
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               144, 158
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               150, 159
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               135, 157
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               146, 158
               

               Conread position:
               26-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 161
               

               Conread position:
               27-338
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               186, 6
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               30-379
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               31-333
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-348
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               146, 152
               

               Conread position:
               36-375
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               40-341
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-381
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               53-381
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               141, 120
               

               Conread position:
               55-381
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               56-375
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               292, 284
               
Show alignments to all cow chromosomes.