Cow genome map
Conread name: | rfbs3940b_b12.y1 |
Conread position: | 1-336 |
Cow position: | chr23:24535922-24535587 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 213 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-381 |
Cow position: | chr23:24560767-24560387 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 244 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-381 |
Cow position: | chr23:25626492-25626866 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 249 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 7-331 |
Cow position: | chr23:24654078-24654402 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 206 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 87, 81 |
Conread position: | 7-377 |
Cow position: | chr23:24560509-24560139 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 245 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 339, 333 |
Conread position: | 7-381 |
Cow position: | chr23:24522607-24522233 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 244 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 8-296 |
Cow position: | chr23:25660449-25660737 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 179 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-303 |
Cow position: | chr23:24546948-24546652 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 199 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 78, 87 |
Conread position: | 8-316 |
Cow position: | chr23:24639766-24640074 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 202 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-322 |
Cow position: | chr23:24626438-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 204 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 296, 0 |
Conread position: | 8-370 |
Cow position: | chr23:25698442-25698080 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 227 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 93, 81 |
Conread position: | 8-376 |
Cow position: | chr23:24547032-24546664 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 241 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 162, 177 |
Conread position: | 8-376 |
Cow position: | chr23:25724081-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 243 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 103, 96 |
Conread position: | 8-377 |
Cow position: | chr23:24535999-24535630 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 239 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 120, 134 |
Conread position: | 8-377 |
Cow position: | chr23:24639514-24639883 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 353, 348 |
Conread position: | 8-381 |
Cow position: | chr23:24547284-24546911 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 86, 81 |
Conread position: | 8-381 |
Cow position: | chr23:24560844-24560471 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 238 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-381 |
Cow position: | chr23:24639346-24639719 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 239 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 35, 46 |
Conread position: | 8-381 |
Cow position: | chr23:25660281-25660654 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 238 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 109, 96 |
Conread position: | 10-381 |
Cow position: | chr23:24639600-24639971 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 240 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 83, 79 |
Conread position: | 11-263 |
Cow position: | chr23:24560337-24560086 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 173 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 224, 211 |
Conread position: | 11-377 |
Cow position: | chr23:25626247-25626610 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 232 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 273, 278 |
Conread position: | 16-375 |
Cow position: | chr23:25626585-25626944 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-336 |
Cow position: | chr23:24522513-24522194 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 218 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 80, 72 |
Conread position: | 17-377 |
Cow position: | chr23:24639439-24639799 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 235 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-377 |
Cow position: | chr23:25698685-25698325 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 230 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 94, 88 |
Conread position: | 17-379 |
Cow position: | chr23:25626001-25626363 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 233 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 77, 71 |
Conread position: | 22-381 |
Cow position: | chr23:24547103-24546743 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 239 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 5, 164 |
Conread position: | 25-381 |
Cow position: | chr23:24535814-24535458 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 220 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 321, 316 |
Conread position: | 26-258 |
Cow position: | chr23:24522420-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 26-302 |
Cow position: | chr23:24560406-24560130 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 188 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-317 |
Cow position: | chr23:25698508-25698217 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 186 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 56, 67 |
Conread position: | 26-336 |
Cow position: | chr23:24639700-24640010 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 215 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 163, 149 |
Conread position: | 26-336 |
Cow position: | chr23:25660215-25660525 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-337 |
Cow position: | chr23:24639280-24639591 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 200 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 74, 81 |
Conread position: | 26-368 |
Cow position: | chr23:25626679-25627021 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 223 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 267, 279 |
Conread position: | 26-375 |
Cow position: | chr23:24547182-24546833 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 230 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 26-377 |
Cow position: | chr23:24560910-24560559 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 220 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 182, 173 |
Conread position: | 26-377 |
Cow position: | chr23:24626372-24626723 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 230 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 320, 314 |
Conread position: | 26-381 |
Cow position: | chr23:24560574-24560219 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-381 |
Cow position: | chr23:24560658-24560303 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 228 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-381 |
Cow position: | chr23:25626094-25626449 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 236 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 168, 149 |
Conread position: | 26-381 |
Cow position: | chr23:25698592-25698237 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 221 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 51, 58 |
Conread position: | 36-377 |
Cow position: | chr23:24522825-24522489 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 223 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 156, 38 |
Conread position: | 38-374 |
Cow position: | chr23:25626190-25626525 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 217 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 331, 0 |
Conread position: | 40-381 |
Cow position: | chr23:24536051-24535710 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 216 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 159, 136 |
Conread position: | 40-381 |
Cow position: | chr23:25660145-25660486 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 218 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 157, 166 |
Conread position: | 46-381 |
Cow position: | chr23:24547330-24546995 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 219 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 300, 295 |
Conread position: | 56-380 |
Cow position: | chr23:24654043-24654367 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 214 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 289, 273 |
Conread position: | 68-381 |
Cow position: | chr23:25724105-25723792 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 210 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 211, 204 |
Conread position: | 110-381 |
Cow position: | chr23:25626010-25626281 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 181 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 81, 67 |
Conread position: | 118-378 |
Cow position: | chr23:24626296-24626556 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 177 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 228, 224 |
Conread position: | 126-381 |
Cow position: | chr23:25724131-25723876 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 167 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 153, 148 |
Conread position: | 140-381 |
Cow position: | chr23:24654043-24654284 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 157-381 |
Cow position: | chr23:24626254-24626475 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 154 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 61, 17 |
Show alignments to all cow chromosomes.