Cow genome map

Conread name: rfbs3940b_b12.y1

Conread position: 1-336
Cow position: chr23:24535922-24535587 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-381
Cow position: chr23:24560767-24560387 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 4-381
Cow position: chr23:25626492-25626866 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 29

Conread position: 7-331
Cow position: chr23:24654078-24654402 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 81

Conread position: 7-377
Cow position: chr23:24560509-24560139 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 339, 333

Conread position: 7-381
Cow position: chr23:24522607-24522233 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 25

Conread position: 8-296
Cow position: chr23:25660449-25660737 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-303
Cow position: chr23:24546948-24546652 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 87

Conread position: 8-316
Cow position: chr23:24639766-24640074 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 8-322
Cow position: chr23:24626438-24626750 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 296, 0

Conread position: 8-370
Cow position: chr23:25698442-25698080 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 81

Conread position: 8-376
Cow position: chr23:24547032-24546664 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 162, 177

Conread position: 8-376
Cow position: chr23:25724081-25723713 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 103, 96

Conread position: 8-377
Cow position: chr23:24535999-24535630 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 120, 134

Conread position: 8-377
Cow position: chr23:24639514-24639883 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 348

Conread position: 8-381
Cow position: chr23:24547284-24546911 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 81

Conread position: 8-381
Cow position: chr23:24560844-24560471 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 8-381
Cow position: chr23:24639346-24639719 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 46

Conread position: 8-381
Cow position: chr23:25660281-25660654 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 238
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 109, 96

Conread position: 10-381
Cow position: chr23:24639600-24639971 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 83, 79

Conread position: 11-263
Cow position: chr23:24560337-24560086 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 224, 211

Conread position: 11-377
Cow position: chr23:25626247-25626610 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 273, 278

Conread position: 16-375
Cow position: chr23:25626585-25626944 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-336
Cow position: chr23:24522513-24522194 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 72

Conread position: 17-377
Cow position: chr23:24639439-24639799 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 17-377
Cow position: chr23:25698685-25698325 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 230
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 88

Conread position: 17-379
Cow position: chr23:25626001-25626363 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 77, 71

Conread position: 22-381
Cow position: chr23:24547103-24546743 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 164

Conread position: 25-381
Cow position: chr23:24535814-24535458 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 321, 316

Conread position: 26-258
Cow position: chr23:24522420-24522188 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 80

Conread position: 26-302
Cow position: chr23:24560406-24560130 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 26-317
Cow position: chr23:25698508-25698217 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 67

Conread position: 26-336
Cow position: chr23:24639700-24640010 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 163, 149

Conread position: 26-336
Cow position: chr23:25660215-25660525 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-337
Cow position: chr23:24639280-24639591 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 81

Conread position: 26-368
Cow position: chr23:25626679-25627021 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 267, 279

Conread position: 26-375
Cow position: chr23:24547182-24546833 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 80

Conread position: 26-377
Cow position: chr23:24560910-24560559 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 220
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 182, 173

Conread position: 26-377
Cow position: chr23:24626372-24626723 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 320, 314

Conread position: 26-381
Cow position: chr23:24560574-24560219 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr23:24560658-24560303 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position: chr23:25626094-25626449 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 168, 149

Conread position: 26-381
Cow position: chr23:25698592-25698237 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 58

Conread position: 36-377
Cow position: chr23:24522825-24522489 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 156, 38

Conread position: 38-374
Cow position: chr23:25626190-25626525 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 331, 0

Conread position: 40-381
Cow position: chr23:24536051-24535710 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 159, 136

Conread position: 40-381
Cow position: chr23:25660145-25660486 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 166

Conread position: 46-381
Cow position: chr23:24547330-24546995 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 300, 295

Conread position: 56-380
Cow position: chr23:24654043-24654367 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 289, 273

Conread position: 68-381
Cow position: chr23:25724105-25723792 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 211, 204

Conread position: 110-381
Cow position: chr23:25626010-25626281 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 67

Conread position: 118-378
Cow position: chr23:24626296-24626556 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 228, 224

Conread position: 126-381
Cow position: chr23:25724131-25723876 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 148

Conread position: 140-381
Cow position: chr23:24654043-24654284 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 157-381
Cow position: chr23:24626254-24626475 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 17

Show alignments to all cow chromosomes.