Cow genome map

Conread name: rfbs3940b_b12.y1

Conread position: 7-286
Cow position:
Alignm length: 282
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 148

Conread position: 7-309
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 211, 220

Conread position: 7-381
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 13

Conread position: 8-233
Cow position:
Alignm length: 226
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-372
Cow position:
Alignm length: 366
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 300

Conread position: 8-377
Cow position:
Alignm length: 370
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 8-381
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-381
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 8-381
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 96

Conread position: 8-381
Cow position:
Alignm length: 376
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 168

Conread position: 8-381
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-381
Cow position:
Alignm length: 373
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 152, 175

Conread position: 10-381
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 179

Conread position: 11-336
Cow position:
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 93

Conread position: 11-342
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 75, 85

Conread position: 11-381
Cow position:
Alignm length: 371
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-381
Cow position:
Alignm length: 374
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 85

Conread position: 11-381
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 93, 100

Conread position: 11-381
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-331
Cow position:
Alignm length: 321
Alignm identity: 200
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 117

Conread position: 15-291
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 15-335
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 313, 0

Conread position: 16-336
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 16-353
Cow position:
Alignm length: 340
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 183, 189

Conread position: 16-378
Cow position:
Alignm length: 363
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-327
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 72

Conread position: 17-378
Cow position:
Alignm length: 363
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 29

Conread position: 18-381
Cow position:
Alignm length: 367
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 94

Conread position: 22-375
Cow position:
Alignm length: 361
Alignm identity: 229
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 38

Conread position: 22-381
Cow position:
Alignm length: 363
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 90

Conread position: 24-378
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 110

Conread position: 24-379
Cow position:
Alignm length: 366
Alignm identity: 233
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 59

Conread position: 25-331
Cow position:
Alignm length: 308
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 253, 248

Conread position: 25-381
Cow position:
Alignm length: 360
Alignm identity: 229
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 209, 214

Conread position: 26-317
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 214, 144

Conread position: 26-335
Cow position:
Alignm length: 311
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 307, 0

Conread position: 26-336
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 69

Conread position: 26-336
Cow position:
Alignm length: 313
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 130, 60

Conread position: 26-336
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 144

Conread position: 26-338
Cow position:
Alignm length: 313
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 26-377
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 108, 115

Conread position: 26-377
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 56

Conread position: 26-378
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 26-378
Cow position:
Alignm length: 354
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 85, 78

Conread position: 26-380
Cow position:
Alignm length: 360
Alignm identity: 240
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 56, 70

Conread position: 26-381
Cow position:
Alignm length: 357
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 63

Conread position: 26-381
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 70

Conread position: 26-381
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 71

Conread position: 26-381
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 140, 158

Conread position: 26-381
Cow position:
Alignm length: 360
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 56

Conread position: 26-381
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 66

Conread position: 26-381
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 70

Conread position: 26-381
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 26

Conread position: 26-381
Cow position:
Alignm length: 360
Alignm identity: 229
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 60

Conread position: 26-381
Cow position:
Alignm length: 358
Alignm identity: 226
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 325, 314

Conread position: 26-381
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-381
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 163

Conread position: 26-381
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 65, 69

Conread position: 29-336
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 141, 56

Conread position: 32-336
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 12, 74

Conread position: 33-296
Cow position:
Alignm length: 264
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 33-381
Cow position:
Alignm length: 353
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 58

Conread position: 35-381
Cow position:
Alignm length: 347
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 38-381
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 322, 312

Conread position: 40-331
Cow position:
Alignm length: 292
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 44-336
Cow position:
Alignm length: 293
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 192, 0

Conread position: 44-381
Cow position:
Alignm length: 340
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 302, 290

Conread position: 46-376
Cow position:
Alignm length: 334
Alignm identity: 204
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 137

Conread position: 47-381
Cow position:
Alignm length: 336
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 308, 303

Conread position: 68-381
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 39

Conread position: 92-381
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 86

Conread position: 110-381
Cow position:
Alignm length: 274
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 62

Conread position: 127-381
Cow position:
Alignm length: 256
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 207, 9

Conread position: 128-378
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 171, 166

Conread position: 137-381
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 189, 217

Show alignments to all cow chromosomes.