Cow genome map
| Conread name: | rfbs3940b_b12.y1 |
| Conread position: | 1-295 |
| Cow position: | chr3:62721867-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-381 |
| Cow position: | chr3:62742400-62742775 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 188, 169 |
| Conread position: | 8-378 |
| Cow position: | chr3:62722028-62721658 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 171, 177 |
| Conread position: | 8-381 |
| Cow position: | chr3:68027137-68027510 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 99 |
| Conread position: | 9-338 |
| Cow position: | chr3:68045815-68046144 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-340 |
| Cow position: | chr3:62742658-62742987 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 179, 92 |
| Conread position: | 16-338 |
| Cow position: | chr3:68045654-68045976 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 16-348 |
| Cow position: | chr3:68045990-68046322 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-381 |
| Cow position: | chr3:62722104-62721739 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 162, 171 |
| Conread position: | 16-381 |
| Cow position: | chr3:62722188-62721823 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 321 |
| Conread position: | 18-336 |
| Cow position: | chr3:62742249-62742567 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 105 |
| Conread position: | 19-381 |
| Cow position: | chr3:62722270-62721907 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 24-302 |
| Cow position: | chr3:68046082-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 153, 161 |
| Conread position: | 24-335 |
| Cow position: | chr3:62742340-62742649 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 152, 14 |
| Conread position: | 24-336 |
| Cow position: | chr3:68045578-68045890 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 118 |
| Conread position: | 24-338 |
| Cow position: | chr3:62743153-62743467 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 26-300 |
| Cow position: | chr3:62742756-62743026 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 26-316 |
| Cow position: | chr3:62742840-62743114 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 26-348 |
| Cow position: | chr3:68027407-68027729 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-378 |
| Cow position: | chr3:62721926-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 138, 168 |
| Conread position: | 26-379 |
| Cow position: | chr3:62742593-62742942 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 292, 48 |
| Conread position: | 26-381 |
| Cow position: | chr3:68045748-68046103 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-381 |
| Cow position: | chr3:68045916-68046271 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 31-337 |
| Cow position: | chr3:68027076-68027382 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 144 |
| Conread position: | 32-381 |
| Cow position: | chr3:68027245-68027594 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 321, 310 |
| Conread position: | 50-378 |
| Cow position: | chr3:62722322-62721994 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 68-341 |
| Cow position: | chr3:62743034-62743302 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 108-381 |
| Cow position: | chr3:68045578-68045851 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 118 |
| Conread position: | 115-338 |
| Cow position: | chr3:68027076-68027299 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 136-381 |
| Cow position: | chr3:62722320-62722075 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-381 |
| Cow position: | chr3:68027019-68027258 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 84 |
Show alignments to all cow chromosomes.