Cow genome map
| Conread name: | rfbs3940b_b12.y1 |
| Conread position: | 8-381 |
| Cow position: | chr8:48406829-48406456 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 8-381 |
| Cow position: | chr8:48407417-48407044 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 258, 267 |
| Conread position: | 8-381 |
| Cow position: | chr8:55581119-55581492 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-381 |
| Cow position: | chr8:55581203-55581576 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 11-378 |
| Cow position: | chr8:46816933-46817300 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 11-381 |
| Cow position: | chr8:45201318-45201688 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 11-381 |
| Cow position: | chr8:45201402-45201772 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-381 |
| Cow position: | chr8:48406905-48406540 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 144, 174 |
| Conread position: | 16-381 |
| Cow position: | chr8:48407325-48406960 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 159, 178 |
| Conread position: | 17-378 |
| Cow position: | chr8:48407156-48406795 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr8:46816771-46817135 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 18-381 |
| Cow position: | chr8:48407576-48407212 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 19-341 |
| Cow position: | chr8:46817024-46817347 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 19-381 |
| Cow position: | chr8:46816352-46816715 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 8, 330 |
| Conread position: | 21-381 |
| Cow position: | chr8:48406733-48406372 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 22-376 |
| Cow position: | chr8:55581385-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 154, 163 |
| Conread position: | 26-301 |
| Cow position: | chr8:46817116-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-322 |
| Cow position: | chr8:48407063-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-338 |
| Cow position: | chr8:48406643-48406331 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 298, 292 |
| Conread position: | 26-338 |
| Cow position: | chr8:55581305-55581617 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 159, 144 |
| Conread position: | 26-339 |
| Cow position: | chr8:46816612-46816925 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 26-341 |
| Cow position: | chr8:45201669-45201984 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 26-381 |
| Cow position: | chr8:45201081-45201436 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 159 |
| Conread position: | 26-381 |
| Cow position: | chr8:45201165-45201520 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 26-381 |
| Cow position: | chr8:45201249-45201604 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-381 |
| Cow position: | chr8:45201501-45201856 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-381 |
| Cow position: | chr8:45201585-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816108-46816463 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 146 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816192-46816547 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 121 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816276-46816631 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816444-46816799 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816528-46816883 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816696-46817051 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 259 |
| Conread position: | 26-381 |
| Cow position: | chr8:46816864-46817219 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 26-381 |
| Cow position: | chr8:48407231-48406876 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 152, 158 |
| Conread position: | 26-381 |
| Cow position: | chr8:48407483-48407128 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 335, 330 |
| Conread position: | 26-381 |
| Cow position: | chr8:55580885-55581240 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 26-381 |
| Cow position: | chr8:55580969-55581324 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 26-381 |
| Cow position: | chr8:55581053-55581408 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 28-381 |
| Cow position: | chr8:45200999-45201352 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 30-381 |
| Cow position: | chr8:55580805-55581156 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 146, 155 |
| Conread position: | 34-381 |
| Cow position: | chr8:46816032-46816379 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 314 |
| Conread position: | 37-381 |
| Cow position: | chr8:46815864-46816211 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 96, 150 |
| Conread position: | 103-381 |
| Cow position: | chr8:48407659-48407380 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 10, 239 |
Show alignments to all cow chromosomes.