Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 11-219
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 82

Conread position: 11-247
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 155, 19

Conread position: 13-218
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 14-218
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 10

Conread position: 16-218
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 28

Conread position: 33-178
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 22

Conread position: 41-178
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 43-214
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 58

Conread position: 43-214
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 43-218
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 43-218
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 122, 51

Conread position: 43-218
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 125

Conread position: 43-251
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 17

Conread position: 45-157
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 45-163
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 45-164
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 12

Conread position: 45-166
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 45-167
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 45-167
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 94

Conread position: 45-184
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 45-185
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 45-196
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 45-198
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 45-202
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 45-208
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 45-210
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 45-210
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 14

Conread position: 45-210
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 34

Conread position: 45-212
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 82

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 45-213
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 56

Conread position: 45-214
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 45-214
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 137

Conread position: 45-215
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 21

Conread position: 45-215
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 14

Conread position: 45-215
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 37

Conread position: 45-215
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 124, 95

Conread position: 45-216
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 35

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 55

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 120

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 33

Conread position: 45-218
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 53

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 23

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 72

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 155

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 170

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 52

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 33

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 12

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 89

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 58

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 170

Conread position: 45-219
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 13

Conread position: 45-220
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 129

Conread position: 45-224
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 57

Conread position: 45-235
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 41

Conread position: 45-244
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 145

Conread position: 45-265
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 141

Conread position: 46-163
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 46-164
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 46-214
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 100

Conread position: 46-215
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 46-218
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 143

Conread position: 47-214
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 47-215
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 47-244
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 10

Conread position: 48-214
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 10

Conread position: 53-213
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 5

Conread position: 53-214
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 151

Conread position: 53-218
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 103

Conread position: 55-199
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 55-214
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 46

Conread position: 55-244
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 24

Conread position: 56-169
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 56-202
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 56-203
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 56-205
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 56-213
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 56-214
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 56-214
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 56-214
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 116

Conread position: 56-214
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 56-214
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 39

Conread position: 56-214
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 32

Conread position: 56-218
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 17

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 43

Conread position: 56-218
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 132

Conread position: 56-218
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 38

Conread position: 56-218
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 56-218
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 56-218
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 12

Conread position: 56-229
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 56-243
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 44

Conread position: 56-244
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 166

Conread position: 57-213
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 57-213
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 57-214
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 133

Conread position: 57-218
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 57-218
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 57-218
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 71

Conread position: 57-218
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 158, 41

Conread position: 57-251
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 178

Conread position: 58-213
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 43

Conread position: 58-218
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 58-274
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 141

Conread position: 59-218
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 36

Conread position: 59-218
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 60-209
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 60-213
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 43

Conread position: 60-214
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 40

Conread position: 61-213
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 61-218
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 44

Conread position: 62-173
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 62-224
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 29

Conread position: 62-224
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 39

Conread position: 63-211
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 37

Conread position: 63-213
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 64-218
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 111

Conread position: 66-218
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 99

Conread position: 66-218
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 149, 39

Conread position: 68-218
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 73-218
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 28

Conread position: 99-218
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.