Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 14-213
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 101

Conread position: 19-173
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 10

Conread position: 25-143
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 29-212
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 17

Conread position: 31-219
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 11

Conread position: 32-218
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 9

Conread position: 42-214
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 43-160
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 43-164
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 43-219
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 19

Conread position: 45-143
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 45-164
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 45-178
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 45-210
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 45-211
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 151

Conread position: 45-212
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 45-212
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 120, 56

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 91

Conread position: 45-213
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 28

Conread position: 45-213
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 45-214
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 55

Conread position: 45-215
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 37

Conread position: 45-215
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 45-215
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 33

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 21

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 170, 65

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 45

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 170, 36

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 59

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 170, 56

Conread position: 45-218
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 45-218
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 15

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 168, 12

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 45-229
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 45-229
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 12

Conread position: 45-229
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 15

Conread position: 45-232
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 45-232
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 112, 49

Conread position: 45-232
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 45-244
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 190

Conread position: 45-244
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 14

Conread position: 45-245
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 115, 57

Conread position: 46-163
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 46-211
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 46-218
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 46-220
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 156

Conread position: 46-222
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 46-229
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 46-231
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 54

Conread position: 47-226
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 19

Conread position: 48-178
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 112, 11

Conread position: 48-214
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 12

Conread position: 49-218
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 8

Conread position: 53-213
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 77

Conread position: 53-218
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 5

Conread position: 55-211
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 92, 45

Conread position: 55-213
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 51

Conread position: 56-151
Cow position:
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-178
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 56-213
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 6

Conread position: 56-214
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 56-214
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 56-214
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 56-215
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 35

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 43

Conread position: 56-218
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 10

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 56-224
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 56-247
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 166

Conread position: 56-251
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 169

Conread position: 56-254
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 188

Conread position: 57-166
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 57-214
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 118

Conread position: 57-214
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 136

Conread position: 57-214
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 57-215
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 93

Conread position: 57-218
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 57-218
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 57-218
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 25

Conread position: 57-226
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 57-232
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 34

Conread position: 57-254
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 16

Conread position: 58-178
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 83

Conread position: 58-210
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 128

Conread position: 58-213
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 110

Conread position: 58-214
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 88

Conread position: 58-218
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 95, 40

Conread position: 59-215
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 19

Conread position: 59-215
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 36

Conread position: 59-218
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 39

Conread position: 59-229
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 60-218
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 80

Conread position: 61-169
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 61-218
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 124

Conread position: 63-196
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 64-218
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 15

Conread position: 64-244
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 14

Conread position: 66-218
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 133

Conread position: 67-214
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 67-215
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 68-215
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 68-218
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 37

Conread position: 68-218
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 68-220
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 92, 67

Conread position: 73-242
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 100-218
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 101-218
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 53

Show alignments to all cow chromosomes.